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OR545507.1__WNN14377.1__Sharanji_gp089__00089

Bact-Vir

OR545507.1__WNN14377.1__Sharanji_gp089__00089

Identity

Accession:
OR545507 ↗
Kingdom:
phage

Quality

94.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_Sharanji

TaxID: 3076819

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-49
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fkeA01 1.10.8.950 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain 0.73 59.0 5.17e-01 91.5% 78.9%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 51.0 4.57e-01 85.1% 75.0%
3c3dA02 1.10.8.240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain 0.67 54.0 4.50e-01 93.6% 95.5%
1qdmA03 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.66 53.0 4.47e-01 87.2% 71.4%
1l7vC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 3.19e-01 89.4% 24.8%
4lg3A02 6.10.20.130 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.64 44.0 4.51e-01 76.6% 79.1%
3tdgA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.62 54.0 3.95e-01 100.0% 67.4%
5vc7A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 51.0 4.31e-01 100.0% 93.1%
3rmiA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.61 43.0 3.33e-01 74.5% 34.3%
6pe0E01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 47.0 4.61e-01 93.6% 83.0%
1tuoA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.60 44.0 3.43e-01 83.0% 80.3%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.60 47.0 4.17e-01 100.0% 77.4%
1uhsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 38.0 3.69e-01 70.2% 59.3%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 45.0 3.37e-01 100.0% 49.3%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.72e-01 80.9% 89.7%
6g94A00 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.54 38.0 2.60e-01 76.6% 57.6%
1ywmA02 1.20.1270.150 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein 0.53 45.0 3.95e-01 100.0% 84.2%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 35.0 3.22e-01 70.2% 54.5%
3kk4A01 1.10.3990.20 Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 0.51 40.0 3.30e-01 100.0% 53.2%
4qgpB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.51 38.0 2.92e-01 80.9% 81.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4119015 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 60.0 5.69e-01 93.6% 78.3%
3479772 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.74 64.0 5.64e-01 100.0% 77.1%
3469150 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 63.0 5.70e-01 97.9% 93.8%
3239257 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.72 61.0 5.71e-01 100.0% 85.0%
3720812 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 3.78e-01 72.3% 30.9%
4097350 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 60.0 5.46e-01 100.0% 78.5%
3232657 367.1.1.0 ↗ few secondary structure elements › Insulin-like › Insulin-like › Insulin-like 0.69 56.0 5.66e-01 100.0% 100.0%
3429317 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.68 55.0 3.51e-01 97.9% 21.6%
3436908 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.64 50.0 3.32e-01 95.7% 20.4%
3957408 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 50.0 4.40e-01 100.0% 70.0%
3729518 2003.1.2.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.61 48.0 3.04e-01 100.0% 36.7%
3734056 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.59 48.0 2.87e-01 100.0% 94.2%
4947212 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.59 48.0 3.84e-01 91.5% 82.0%
3843743 196.1.1.2 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS-like 0.59 45.0 2.97e-01 83.0% 56.5%
5008115 101.1.1.542 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF790 0.59 39.0 4.03e-01 70.2% 77.8%
3386333 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.58 49.0 4.23e-01 93.6% 65.3%
3778380 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 39.0 3.46e-01 70.2% 50.0%
4023647 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.58 45.0 4.15e-01 97.9% 98.6%
3691597 2485.1.1.56 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rng_hyd_C 0.56 39.0 2.57e-01 74.5% 42.2%
3243495 101.1.1.289 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB 0.56 37.0 3.61e-01 70.2% 61.8%
3556827 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.55 43.0 3.80e-01 87.2% 97.1%
3342510 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.53 41.0 2.79e-01 100.0% 24.2%
3734625 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 44.0 2.68e-01 100.0% 35.8%
3751123 102.4.1.0 ↗ alpha arrays › HhH/H2TH › YozE-like › YozE-like 0.52 42.0 3.68e-01 89.4% 94.3%
4182567 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.52 40.0 2.77e-01 83.0% 48.5%
3888162 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.52 42.0 3.29e-01 100.0% 85.8%
3855331 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.70e-01 91.5% 95.7%
4000710 1106.1.1.1 ↗ alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 0.51 35.0 2.98e-01 72.3% 57.6%
3808373 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.50 38.0 2.25e-01 93.6% 9.8%