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OR545507.1__WNN14669.1__Sharanji_gp388__00381

Bact-Vir

OR545507.1__WNN14669.1__Sharanji_gp388__00381

Identity

Accession:
OR545507 ↗
Kingdom:
phage

Quality

58.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 144-249
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14301.13 best DUF4376 33.7 6.10e-08 96.2% 85.9%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l8dA00 1.10.287.510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 51.0 5.25e-01 86.8% 70.9%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 53.0 5.30e-01 86.8% 75.2%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.71 44.0 4.99e-01 86.8% 81.7%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 51.0 5.15e-01 86.8% 78.3%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 46.0 4.88e-01 84.9% 83.0%
3kdqA00 6.10.320.10 Special › Helix non-globular › Ferritin › 0.64 45.0 3.95e-01 89.6% 50.0%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.64 46.0 5.14e-01 98.1% 95.2%
3k8pC01 1.20.58.1440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 33.0 3.33e-01 83.0% 49.5%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 47.0 4.49e-01 92.5% 67.5%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.07e-01 78.3% 72.0%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 33.0 3.71e-01 73.6% 68.8%
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.61 44.0 4.30e-01 84.0% 68.1%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 49.0 3.99e-01 85.8% 51.1%
1bvyB00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.60 53.0 3.57e-01 100.0% 63.7%
5d18A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 40.0 3.26e-01 75.5% 37.1%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 34.0 3.56e-01 72.6% 63.3%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.58 32.0 3.93e-01 100.0% 85.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.92e-01 78.3% 75.0%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 36.0 3.42e-01 73.6% 53.2%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 30.0 2.64e-01 71.7% 34.4%
4al0A00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.56 44.0 3.97e-01 100.0% 61.0%
2kg7B00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 33.0 3.45e-01 76.4% 62.9%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.81e-01 78.3% 78.1%
3pm0A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 50.0 3.27e-01 100.0% 62.1%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 38.0 3.23e-01 73.6% 74.3%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 48.0 4.13e-01 99.1% 85.5%
3pukA03 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.54 37.0 3.81e-01 71.7% 100.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.53 32.0 3.41e-01 79.2% 67.0%
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 35.0 3.63e-01 98.1% 71.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 4.35e-01 81.1% 100.0%
3nqpA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 37.0 2.47e-01 84.9% 16.5%
4iggB06 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.52 46.0 3.64e-01 96.2% 67.4%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.49e-01 78.3% 70.5%
2innB00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.51 39.0 2.53e-01 79.2% 44.0%
1udyA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 34.0 3.30e-01 88.7% 60.0%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.50 45.0 3.97e-01 100.0% 76.7%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.50 35.0 3.42e-01 100.0% 64.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3985490 192.2.1.5 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 0.75 69.0 6.53e-01 99.1% 84.7%
5001086 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.75 39.0 3.09e-01 82.1% 27.2%
4607020 192.2.1.3 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook 0.73 49.0 4.54e-01 86.8% 54.1%
3996353 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.73 55.0 3.25e-01 86.8% 11.0%
5047150 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.72 49.0 3.92e-01 86.8% 37.0%
5009323 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 40.0 3.48e-01 80.2% 37.7%
3394225 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 53.0 5.20e-01 86.8% 72.2%
3859550 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 53.0 5.10e-01 86.8% 69.2%
5028061 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 51.0 5.45e-01 85.8% 87.8%
4662222 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 51.0 4.89e-01 89.6% 66.7%
3586018 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.70 52.0 4.74e-01 86.8% 59.3%
3234976 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 54.0 5.33e-01 86.8% 78.2%
5029669 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.69 50.0 4.84e-01 85.8% 67.5%
4995244 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.68 49.0 4.91e-01 84.9% 72.7%
3392569 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.68 50.0 4.70e-01 84.9% 64.8%
3594965 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.68 51.0 4.69e-01 86.8% 60.7%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 54.0 4.92e-01 87.7% 65.7%
4025452 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 49.0 4.76e-01 86.8% 70.4%
3244401 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 48.0 4.71e-01 84.9% 70.4%
5036014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 48.0 5.00e-01 84.9% 84.2%
3493963 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.66 49.0 5.02e-01 85.8% 82.0%
3944006 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 50.0 4.70e-01 87.7% 67.2%
4981980 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 48.0 4.73e-01 86.8% 72.2%
3628456 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 49.0 4.59e-01 86.8% 65.6%
4010416 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 49.0 4.63e-01 87.7% 67.2%
3227000 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.65 52.0 3.13e-01 86.8% 12.8%
4244937 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.64 52.0 3.77e-01 86.8% 96.4%
1269742 3837.1.1.1 alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 0.64 45.0 3.95e-01 89.6% 50.0%
3958678 3281.1.2.0 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related 0.64 46.0 3.67e-01 100.0% 36.0%
3886971 3704.1.1.0 alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain 0.63 30.0 2.50e-01 100.0% 26.3%
3271834 109.4.1.816 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N 0.63 45.0 2.72e-01 74.5% 16.3%
4940192 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 49.0 4.80e-01 86.8% 77.2%
3614763 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 48.0 4.67e-01 86.8% 72.5%
3873955 7016.1.1.0 extended segments › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain 0.62 47.0 4.12e-01 79.2% 91.6%
3214720 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 47.0 4.90e-01 84.9% 88.4%
3970671 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 36.0 4.15e-01 70.8% 81.3%
4029803 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 49.0 4.57e-01 86.8% 69.2%
3254236 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.61 49.0 4.93e-01 89.6% 86.7%
3506058 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.61 48.0 4.93e-01 84.0% 89.0%
3302552 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.60 46.0 4.22e-01 100.0% 61.4%
3903910 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.60 50.0 4.12e-01 89.6% 80.0%
3718742 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 45.0 2.71e-01 100.0% 11.0%
3929630 4323.1.1.1 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.59 45.0 3.98e-01 81.1% 63.9%
5041715 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 47.0 4.69e-01 86.8% 89.1%
4306767 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 2.84e-01 84.9% 33.7%
5071736 2004.1.1.277 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HerA_C 0.57 51.0 3.43e-01 100.0% 37.7%
3593102 1016.1.1.0 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 0.56 40.0 3.79e-01 75.5% 70.0%
3267498 109.6.1.2 alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.56 44.0 3.00e-01 87.7% 43.2%
2125683 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.55 49.0 4.19e-01 99.1% 84.5%
5004012 2004.1.1.714 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_13 0.54 46.0 3.25e-01 93.4% 38.8%
4972502 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 46.0 3.71e-01 93.4% 66.3%
5005743 2484.1.1.87 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB-like_C 0.53 40.0 3.32e-01 78.3% 100.0%
3698887 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.53 46.0 2.97e-01 100.0% 19.2%
3359387 5051.1.1.6 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.53 46.0 3.04e-01 95.3% 72.9%
4018012 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.53 47.0 3.11e-01 100.0% 94.0%
3787913 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 45.0 3.18e-01 99.1% 87.1%
3349197 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.51 35.0 2.76e-01 72.6% 63.3%
3446412 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.50 41.0 2.92e-01 87.7% 32.9%
D2 medium residues 25-129
PDB