Back to structures

OR545507.1__WNN14702.1__Sharanji_gp421__00414

Bact-Vir

OR545507.1__WNN14702.1__Sharanji_gp421__00414

Identity

Accession:
OR545507 ↗
Kingdom:
phage

Quality

72.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-138
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.66 46.0 4.57e-01 72.8% 100.0%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.64 55.0 4.98e-01 91.9% 83.2%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.62 52.0 4.78e-01 88.2% 77.8%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 47.0 4.53e-01 83.1% 94.8%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 38.0 3.67e-01 71.3% 55.8%
2qziA00 3.40.1720.10 Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like 0.59 34.0 3.91e-01 89.7% 76.2%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 43.0 4.69e-01 84.6% 90.4%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.57 43.0 4.22e-01 78.7% 89.3%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 44.0 3.39e-01 83.1% 90.4%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.57 35.0 3.74e-01 71.3% 69.2%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 36.0 3.78e-01 91.2% 72.5%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.54 42.0 4.15e-01 82.4% 97.2%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.54 40.0 4.23e-01 77.2% 91.0%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.54 42.0 3.22e-01 82.4% 91.9%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 40.0 3.95e-01 78.7% 97.9%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 3.19e-01 82.4% 90.6%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 41.0 3.10e-01 84.6% 98.0%
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 27.0 2.96e-01 98.5% 56.9%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.52 46.0 4.41e-01 96.3% 91.1%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.51 46.0 4.18e-01 98.5% 85.9%
5w0kA01 3.90.380.20 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II 0.51 41.0 3.12e-01 86.0% 54.2%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.51 29.0 2.84e-01 98.5% 46.8%
4o4oA00 2.40.128.590 Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain 0.50 44.0 3.88e-01 94.1% 72.1%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3294919 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.61 44.0 3.14e-01 74.3% 58.2%
3228184 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.60 31.0 3.28e-01 82.4% 54.4%
3456369 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.60 51.0 4.66e-01 92.6% 77.8%
3279448 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.60 40.0 4.12e-01 89.7% 69.9%
3338842 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.58 48.0 3.49e-01 89.0% 52.8%
3179848 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.58 43.0 4.35e-01 78.7% 91.4%
3251263 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.57 46.0 3.39e-01 88.2% 55.1%
3475493 5.1.4.78 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.56 44.0 3.01e-01 82.4% 73.5%
3335598 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.56 47.0 3.45e-01 89.0% 55.6%
3645476 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.56 40.0 4.50e-01 75.0% 100.0%
3908432 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.56 46.0 3.29e-01 89.0% 50.9%
3612517 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.55 44.0 2.81e-01 86.8% 71.5%
3637480 5.1.4.378 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF27702 0.55 46.0 3.32e-01 92.6% 95.2%
3563261 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 43.0 3.47e-01 85.3% 88.6%
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.54 44.0 3.96e-01 89.0% 88.9%
3524525 633.23.1.4 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.54 41.0 3.51e-01 85.3% 49.1%
3585370 5.1.3.112 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40_2 0.54 42.0 3.51e-01 82.4% 82.9%
5020511 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.53 35.0 3.80e-01 74.3% 79.1%
3825307 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 42.0 2.62e-01 85.3% 34.0%
3516397 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.53 44.0 3.95e-01 91.2% 65.4%
3626081 10.1.1.83 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Menorin_C 0.52 40.0 3.71e-01 78.7% 95.3%
4015961 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 41.0 2.82e-01 83.1% 63.2%
3734097 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 3.14e-01 91.2% 94.2%
3482455 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 42.0 3.62e-01 86.0% 74.8%
2095478 3146.1.1.1 a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H 0.51 41.0 2.80e-01 86.0% 34.6%
3554886 5.1.4.155 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 0.51 42.0 3.04e-01 87.5% 86.7%
3581438 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.51 46.0 3.40e-01 100.0% 73.2%
3683051 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.51 45.0 3.27e-01 100.0% 71.6%
3246316 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.50 42.0 3.77e-01 91.2% 83.4%
2639646 331.3.1.19 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.50 44.0 3.89e-01 96.3% 77.5%
3901822 5.1.5.50 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › MIOS_WD40 0.50 41.0 3.01e-01 88.2% 87.8%