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OR545507.1__WNN14755.1__Sharanji_gp474__00467

Bact-Vir

OR545507.1__WNN14755.1__Sharanji_gp474__00467

Identity

Accession:
OR545507 ↗
Kingdom:
phage

Quality

47.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-118
PDB
D2 high residues 238-322
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05406.21 best WGR 44.6 1.70e-11 81.2% 89.9%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.96 72.0 7.79e-01 80.0% 89.2%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 62.0 4.43e-01 100.0% 87.0%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 61.0 4.41e-01 100.0% 87.8%
1dglA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 46.0 3.28e-01 70.6% 27.8%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 60.0 4.39e-01 100.0% 87.3%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 60.0 4.53e-01 100.0% 86.7%
1ux6A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 4.43e-01 100.0% 88.0%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.65 50.0 4.92e-01 81.2% 93.3%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 59.0 4.06e-01 100.0% 92.3%
4bd4A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.65 50.0 4.59e-01 82.4% 98.2%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.64 50.0 4.19e-01 81.2% 52.2%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.64 53.0 4.33e-01 89.4% 80.0%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 45.0 3.80e-01 74.1% 51.4%
1ulvA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 44.0 3.08e-01 74.1% 82.7%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 49.0 4.18e-01 83.5% 89.3%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.61 45.0 3.59e-01 82.4% 38.5%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 54.0 4.29e-01 100.0% 85.3%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 52.0 4.32e-01 95.3% 89.5%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 47.0 4.33e-01 83.5% 90.0%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.59 45.0 3.10e-01 82.4% 42.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.59 44.0 3.81e-01 81.2% 72.8%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 44.0 4.02e-01 82.4% 94.9%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.58 40.0 3.77e-01 71.8% 59.4%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.60e-01 82.4% 79.9%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 35.0 3.31e-01 90.6% 48.1%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.57 40.0 3.55e-01 75.3% 50.0%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 38.0 4.26e-01 89.4% 86.6%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.57 47.0 4.81e-01 91.8% 100.0%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 44.0 3.73e-01 82.4% 91.4%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 43.0 3.35e-01 82.4% 78.5%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 37.0 3.93e-01 71.8% 78.9%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 46.0 3.18e-01 94.1% 81.2%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.06e-01 100.0% 92.6%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.55 47.0 3.25e-01 96.5% 81.5%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.54 39.0 3.60e-01 77.6% 74.6%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 44.0 3.20e-01 91.8% 83.6%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 3.37e-01 75.3% 80.3%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.54 41.0 3.87e-01 81.2% 92.2%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.53 40.0 3.21e-01 81.2% 91.0%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 36.0 3.73e-01 71.8% 90.1%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.52 45.0 3.96e-01 96.5% 91.5%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.52 45.0 4.21e-01 97.6% 84.9%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 45.0 3.24e-01 100.0% 83.6%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 42.0 3.52e-01 91.8% 68.5%
2f20A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.51 35.0 2.67e-01 74.1% 96.6%
3rjuA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 39.0 2.65e-01 85.9% 22.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1034013 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.95 73.0 7.65e-01 81.2% 85.9%
3228242 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.92 76.0 7.09e-01 84.7% 89.0%
3484248 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.91 75.0 6.48e-01 84.7% 76.7%
3719687 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.80 49.0 5.23e-01 74.1% 70.7%
3871253 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.75 48.0 4.01e-01 74.1% 39.3%
3557698 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.73 47.0 4.44e-01 70.6% 55.0%
3199763 220.1.1.202 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.71 49.0 4.24e-01 74.1% 48.0%
3167247 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 53.0 3.41e-01 78.8% 38.1%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.69 55.0 4.55e-01 85.9% 81.3%
3596663 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.68 52.0 3.60e-01 81.2% 36.0%
3443454 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.68 62.0 4.39e-01 100.0% 86.0%
4114695 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.68 61.0 4.26e-01 100.0% 78.9%
4596967 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 61.0 4.41e-01 100.0% 85.4%
3286469 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 48.0 3.74e-01 74.1% 36.6%
5038627 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 56.0 3.72e-01 91.8% 52.6%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.66 46.0 4.09e-01 78.8% 50.4%
3283514 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.66 47.0 3.32e-01 74.1% 38.2%
4957722 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.65 53.0 4.45e-01 87.1% 96.4%
3224967 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 53.0 3.77e-01 96.5% 30.2%
5034929 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.64 48.0 3.67e-01 82.4% 62.6%
3708543 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.63 49.0 3.58e-01 82.4% 80.9%
3230371 3180.1.1.0 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.63 53.0 4.87e-01 100.0% 70.9%
3705072 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.63 48.0 4.34e-01 81.2% 67.0%
5015089 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 51.0 3.65e-01 87.1% 94.3%
4464658 274.1.1.59 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG 0.62 43.0 3.86e-01 70.6% 52.6%
3520914 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 56.0 3.18e-01 98.8% 11.1%
3605378 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.62 47.0 4.36e-01 81.2% 70.0%
3216442 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.62 53.0 3.95e-01 100.0% 37.6%
3930831 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 3.78e-01 97.6% 85.4%
3831652 71.1.1.17 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 0.62 49.0 3.99e-01 85.9% 82.3%
4954762 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.61 47.0 4.20e-01 83.5% 81.6%
3596180 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 48.0 4.51e-01 85.9% 96.2%
853 9.1.1.23 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.60 47.0 4.09e-01 83.5% 88.6%
3930399 4075.1.1.0 a+b complex topology › RGC domain › RGC domain › RGC domain 0.60 42.0 3.98e-01 71.8% 96.0%
3529020 79.1.1.33 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › BRICHOS 0.60 46.0 3.88e-01 80.0% 66.7%
3890928 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.60 44.0 3.43e-01 77.6% 85.0%
3495405 3131.1.1.1 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.60 44.0 3.71e-01 81.2% 45.3%
3922015 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.59 50.0 4.17e-01 88.2% 92.6%
3929256 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 44.0 3.68e-01 77.6% 87.9%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 45.0 3.84e-01 82.4% 86.4%
3866695 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.58 45.0 3.66e-01 82.4% 91.0%
3427602 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 50.0 3.43e-01 96.5% 79.4%
3288281 881.1.1.15 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.58 41.0 3.45e-01 72.9% 45.8%
3983708 219.1.1.109 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Toxin_15 0.57 51.0 3.90e-01 97.6% 56.4%
5043752 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.52e-01 94.1% 56.7%
3257265 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 39.0 3.25e-01 74.1% 40.0%
3630412 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 47.0 3.10e-01 91.8% 77.7%
3943894 77.1.1.7 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.57 47.0 4.15e-01 90.6% 78.4%
3597078 10.1.1.35 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.57 49.0 3.81e-01 97.6% 60.5%
3894256 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 43.0 3.61e-01 85.9% 86.7%
3520119 5.1.4.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.56 43.0 2.81e-01 83.5% 87.6%
4849080 5084.1.1.44 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HphA_C 0.56 41.0 4.27e-01 77.6% 95.0%
3822567 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.56 47.0 3.22e-01 95.3% 68.4%
4022780 243.18.1.0 a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain 0.55 42.0 4.02e-01 83.5% 96.1%
4394739 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 38.0 4.13e-01 74.1% 87.1%
4992208 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.54 40.0 2.93e-01 77.6% 35.6%
3928508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 45.0 3.06e-01 95.3% 86.8%
4026739 220.1.1.277 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30698 0.54 48.0 4.16e-01 94.1% 100.0%
3938746 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 3.05e-01 97.6% 82.9%
4012524 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.53 39.0 2.60e-01 77.6% 35.4%
3424048 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.53 45.0 2.92e-01 95.3% 70.9%
3597540 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 47.0 3.11e-01 98.8% 75.7%
4363296 330.11.1.1 a+b two layers › dsRBD-like › Anti-lipopolysaccharide factor (ALF) › Anti-lipopolysaccharide factor (ALF) › Anti-LPS-SCYG 0.53 44.0 4.22e-01 92.9% 91.0%
3340221 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 42.0 2.77e-01 88.2% 85.6%
3080512 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.52 39.0 3.77e-01 81.2% 74.2%
3500713 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.52 43.0 3.79e-01 89.4% 69.6%
5035423 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 41.0 4.10e-01 82.4% 89.4%
3325360 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 38.0 4.10e-01 85.9% 95.7%
3833570 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.51 42.0 3.04e-01 89.4% 50.4%
5038844 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.51 38.0 3.95e-01 78.8% 90.0%
3805925 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 42.0 2.93e-01 94.1% 76.7%
3501861 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 37.0 3.50e-01 90.6% 61.9%
4423214 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.50 41.0 3.81e-01 87.1% 80.0%