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OR545507.1__WNN14813.1__Sharanji_gp532__00525

Bact-Vir

OR545507.1__WNN14813.1__Sharanji_gp532__00525

Identity

Accession:
OR545507 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_Sharanji

TaxID: 3076819

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-26_42-66
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 46.0 2.83e-01 100.0% 11.5%
3po3S02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 48.0 4.19e-01 100.0% 54.1%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 46.0 4.52e-01 100.0% 70.2%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 37.0 3.48e-01 98.0% 43.9%
2dlxA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 47.0 3.60e-01 82.4% 67.3%
2r7cA02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.58 43.0 3.12e-01 82.4% 42.7%
4e72A01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.57 38.0 2.95e-01 80.4% 29.0%
3d8kD00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 44.0 2.78e-01 92.2% 41.0%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.55 40.0 2.83e-01 82.4% 77.4%
6grrA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 45.0 3.52e-01 100.0% 43.4%
1jp4A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.54 45.0 3.21e-01 100.0% 81.5%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 40.0 3.35e-01 100.0% 48.1%
1x3zA04 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 44.0 4.31e-01 100.0% 90.7%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4947278 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.83 58.0 5.94e-01 100.0% 75.5%
4616279 375.1.1.95 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_13 0.71 60.0 5.57e-01 100.0% 73.8%
3580089 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 54.0 4.28e-01 100.0% 49.1%
3539717 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 52.0 4.88e-01 100.0% 80.0%
5062944 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 44.0 4.69e-01 98.0% 93.2%
3739112 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.60 51.0 4.05e-01 100.0% 82.7%
3390587 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 47.0 4.52e-01 100.0% 90.0%
5006030 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 49.0 4.29e-01 100.0% 74.7%
3920450 2484.1.1.145 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 0.55 46.0 3.07e-01 100.0% 37.8%
4967533 375.1.1.41 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Methyltransf_13 0.54 51.0 4.79e-01 100.0% 91.7%
3588379 375.1.1.90 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 0.54 50.0 4.59e-01 100.0% 78.5%
4278171 375.1.1.41 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Methyltransf_13 0.53 48.0 4.56e-01 100.0% 91.7%
3354684 3364.1.1.2 ↗ few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF 0.52 41.0 4.16e-01 100.0% 96.1%
3949136 3900.1.1.1 ↗ a+b complex topology › Phospholipase effector Tle1 C-terminal domain › Phospholipase effector Tle1 C-terminal domain › Phospholipase effector Tle1 C-terminal domain › T6SS_Tle1-like_C 0.52 42.0 2.65e-01 100.0% 15.6%
3819080 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.52 40.0 3.56e-01 100.0% 58.7%
3497884 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.55e-01 100.0% 57.1%
3702659 2.1.1.92 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_D_N 0.51 43.0 3.30e-01 100.0% 56.4%
4059005 1.1.17.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S7 0.51 40.0 2.73e-01 100.0% 42.3%
3781087 219.1.1.111 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.51 46.0 2.74e-01 100.0% 15.3%
3872280 11.1.1.623 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMEM131L_4 0.51 39.0 2.87e-01 94.1% 63.4%
5072980 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.50 42.0 2.81e-01 100.0% 94.5%