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OR548257.1__WNO28879.1__X__00059
Bact-VirOR548257.1__WNO28879.1__X__00059
Identity
- Accession:
- OR548257 ↗
- Kingdom:
- phage
Quality
61.2
mean pLDDT
Taxonomy
TaxID: 3076821
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-60
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 54.0 | 3.65e-01 | 100.0% | 23.2% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 50.0 | 3.22e-01 | 93.9% | 50.2% |
| 2jl6101 | 2.20.150.30 | Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › | 0.60 | 34.0 | 3.62e-01 | 75.5% | 62.8% |
| 2wsaA00 | 3.40.630.170 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.54 | 46.0 | 2.74e-01 | 100.0% | 19.5% |
| 1vq8B03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.53 | 36.0 | 2.85e-01 | 71.4% | 66.7% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.51 | 38.0 | 2.37e-01 | 100.0% | 69.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256359 | 5.1.4.151 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BCAS3_WD40 | 0.63 | 44.0 | 2.55e-01 | 77.6% | 7.5% |
| 3619356 | 1116.1.1.2 ↗ | a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD | 0.59 | 40.0 | 2.67e-01 | 73.5% | 21.0% |
| 4594837 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.56 | 40.0 | 3.47e-01 | 75.5% | 97.5% |
| 3742699 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.56 | 44.0 | 3.13e-01 | 87.8% | 57.5% |
| 5041889 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 44.0 | 3.10e-01 | 98.0% | 34.0% |
| 3665094 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 38.0 | 2.28e-01 | 73.5% | 11.2% |
| 3655743 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.52 | 39.0 | 2.59e-01 | 85.7% | 40.0% |
| 5022761 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.50 | 37.0 | 2.47e-01 | 89.8% | 50.4% |
| 3814285 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.50 | 38.0 | 3.15e-01 | 93.9% | 41.8% |