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OR553893.1__WNN93809.1__SEA_ZENITSU_8__00008

Bact-Vir

OR553893.1__WNN93809.1__SEA_ZENITSU_8__00008

Identity

Accession:
OR553893 ↗
Kingdom:
phage

Quality

75.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Elerivirus› Microbacterium_phage_Zenitsu

TaxID: 3077791

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-104
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 28.0 3.35e-01 95.2% 73.9%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.54 48.0 4.37e-01 100.0% 87.3%
1loxA01 1.20.245.10 Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 0.52 38.0 2.61e-01 78.8% 37.1%
6j09A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.52 29.0 3.38e-01 92.3% 80.6%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.51 31.0 3.61e-01 83.7% 90.0%
3c7aA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 39.0 3.21e-01 83.7% 49.5%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3591456 5081.1.1.0 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.58 51.0 4.18e-01 97.1% 87.9%
3628972 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.56 48.0 3.93e-01 98.1% 84.8%
3799048 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 48.0 3.97e-01 98.1% 89.0%
3016706 4275.1.1.0 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like 0.56 47.0 4.78e-01 100.0% 97.1%
3936161 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.56 47.0 3.85e-01 98.1% 84.7%
3503188 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.55 47.0 3.95e-01 98.1% 91.1%
3431805 5081.1.1.4 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.55 49.0 4.07e-01 98.1% 90.0%
4520626 5037.1.1.1 ↗ alpha bundles › Bacterial photosystem II reaction centre L and M subunits-like › Bacterial photosystem II reaction centre L and M subunits-like › Bacterial photosystem II reaction centre L and M subunits-like › Photo_RC 0.54 43.0 3.06e-01 86.5% 40.6%
364451 101.1.9.22 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_54 0.54 33.0 3.39e-01 83.7% 61.2%
3575264 604.12.1.61 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like 0.54 41.0 4.07e-01 85.6% 86.1%
5082662 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.53 47.0 3.76e-01 100.0% 52.9%
4008902 4268.2.1.20 ↗ alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA › DUF932 0.52 41.0 4.03e-01 94.2% 77.9%
5022789 2003.1.5.444 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1156 0.51 40.0 2.75e-01 84.6% 69.5%
3921261 5081.1.1.4 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.51 45.0 3.71e-01 99.0% 63.1%
3720445 5069.1.1.38 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Frag1 0.50 44.0 3.51e-01 100.0% 51.6%