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OR553903.1__WNN94800.1__SEA_PHREDRICK_247__00211
Bact-VirOR553903.1__WNN94800.1__SEA_PHREDRICK_247__00211
Identity
- Accession:
- OR553903 ↗
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stanwilliamsviridae›
Gilsonvirus›
Streptomyces_phage_Phredrick
TaxID: 3035387
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-76
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.69 | 61.0 | 5.19e-01 | 100.0% | 67.9% |
| 3hxkA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 53.0 | 3.41e-01 | 100.0% | 84.4% |
| 1ewrA02 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.61 | 41.0 | 3.16e-01 | 72.0% | 86.6% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 42.0 | 4.06e-01 | 76.0% | 70.7% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 45.0 | 4.23e-01 | 100.0% | 66.7% |
| 2d88A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.56 | 43.0 | 3.46e-01 | 88.0% | 43.8% |
| 2l22A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.55 | 39.0 | 3.24e-01 | 76.0% | 50.5% |
| 4c98A01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 3.55e-01 | 94.0% | 50.5% |
| 7e42A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 39.0 | 3.61e-01 | 92.0% | 59.5% |
| 1dosA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 2.68e-01 | 100.0% | 75.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5074371 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 56.0 | 4.04e-01 | 98.0% | 82.8% |
| 4034200 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.62 | 43.0 | 4.00e-01 | 74.0% | 83.1% |
| 4991351 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.58 | 47.0 | 4.14e-01 | 94.0% | 92.5% |