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OR553913.1__WNN96003.1__SEA_HIRKO_53__00053
Bact-VirOR553913.1__WNN96003.1__SEA_HIRKO_53__00053
Identity
- Accession:
- OR553913 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Berryhillviridae›
Vibakivirus›
Arthrobacter_phage_Hirko
TaxID: 3077804
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-54
Domain cluster:
representative
CATH (88)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gjhA00 | 3.30.1070.20 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › | 0.71 | 56.0 | 5.39e-01 | 89.8% | 82.5% |
| 6vu9A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.70 | 51.0 | 3.21e-01 | 79.6% | 31.0% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.70 | 56.0 | 4.88e-01 | 93.9% | 90.0% |
| 4kr6A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.69 | 60.0 | 4.13e-01 | 100.0% | 41.5% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.69 | 58.0 | 4.69e-01 | 95.9% | 52.6% |
| 1i7qA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.68 | 54.0 | 3.13e-01 | 93.9% | 17.2% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 51.0 | 3.91e-01 | 95.9% | 34.1% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.66 | 52.0 | 4.26e-01 | 98.0% | 44.7% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.65 | 51.0 | 4.70e-01 | 91.8% | 65.7% |
| 3i4pA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 52.0 | 4.47e-01 | 93.9% | 53.6% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.65 | 49.0 | 3.65e-01 | 95.9% | 30.0% |
| 1ct9A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 51.0 | 3.57e-01 | 95.9% | 32.3% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.64 | 54.0 | 4.87e-01 | 100.0% | 95.8% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 48.0 | 3.70e-01 | 95.9% | 32.5% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.63 | 49.0 | 3.66e-01 | 87.8% | 33.1% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 4.59e-01 | 100.0% | 95.1% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 51.0 | 3.56e-01 | 95.9% | 88.0% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 4.57e-01 | 100.0% | 100.0% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 4.24e-01 | 100.0% | 80.8% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 48.0 | 3.53e-01 | 93.9% | 91.9% |
| 3fzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 50.0 | 3.39e-01 | 93.9% | 75.5% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.62 | 46.0 | 4.15e-01 | 95.9% | 56.0% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 4.63e-01 | 100.0% | 95.9% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.62 | 47.0 | 4.10e-01 | 95.9% | 53.8% |
| 3ehgA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 42.0 | 3.26e-01 | 75.5% | 34.4% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 46.0 | 3.04e-01 | 81.6% | 36.7% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 46.0 | 3.59e-01 | 95.9% | 36.5% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 47.0 | 3.72e-01 | 95.9% | 38.7% |
| 4zevA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.61 | 45.0 | 3.59e-01 | 95.9% | 38.3% |
| 2efpA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.61 | 49.0 | 4.06e-01 | 95.9% | 81.6% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 48.0 | 4.14e-01 | 93.9% | 56.5% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.60 | 50.0 | 4.08e-01 | 95.9% | 82.1% |
| 2amyA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.60 | 47.0 | 3.95e-01 | 98.0% | 99.0% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 46.0 | 3.29e-01 | 83.7% | 98.1% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 51.0 | 4.16e-01 | 100.0% | 78.8% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.60 | 48.0 | 3.92e-01 | 98.0% | 95.3% |
| 4durB01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.60 | 47.0 | 4.25e-01 | 100.0% | 63.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 48.0 | 3.91e-01 | 98.0% | 46.4% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.59 | 45.0 | 4.05e-01 | 93.9% | 57.5% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 44.0 | 3.96e-01 | 95.9% | 56.0% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 4.17e-01 | 100.0% | 93.5% |
| 2p5vA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.59 | 45.0 | 3.91e-01 | 93.9% | 52.4% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.59 | 45.0 | 4.14e-01 | 89.8% | 63.4% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 47.0 | 3.35e-01 | 93.9% | 28.7% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 44.0 | 4.07e-01 | 93.9% | 70.7% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.59 | 48.0 | 4.25e-01 | 98.0% | 68.8% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 48.0 | 3.86e-01 | 98.0% | 45.9% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.59 | 47.0 | 3.93e-01 | 95.9% | 51.0% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 45.0 | 3.24e-01 | 87.8% | 49.7% |
| 1n4nA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.58 | 43.0 | 4.42e-01 | 95.9% | 91.5% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 3.93e-01 | 98.0% | 87.4% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 41.0 | 2.73e-01 | 79.6% | 29.1% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.58 | 47.0 | 3.54e-01 | 100.0% | 93.8% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.57 | 47.0 | 3.80e-01 | 95.9% | 100.0% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 3.96e-01 | 91.8% | 62.7% |
| 4b09B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 3.61e-01 | 87.8% | 95.9% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 44.0 | 3.69e-01 | 93.9% | 47.5% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 47.0 | 3.98e-01 | 95.9% | 94.4% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 44.0 | 3.69e-01 | 100.0% | 80.6% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.56 | 48.0 | 3.78e-01 | 98.0% | 100.0% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 46.0 | 3.92e-01 | 95.9% | 63.2% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.51e-01 | 87.8% | 59.8% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.55 | 48.0 | 4.26e-01 | 100.0% | 89.2% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 45.0 | 4.14e-01 | 98.0% | 100.0% |
| 1z7uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.39e-01 | 87.8% | 55.5% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.39e-01 | 87.8% | 54.5% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 46.0 | 3.77e-01 | 100.0% | 85.6% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 45.0 | 4.02e-01 | 100.0% | 96.2% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.63e-01 | 95.9% | 55.8% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 39.0 | 3.69e-01 | 95.9% | 62.1% |
| 5xyiK00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.64e-01 | 91.8% | 57.8% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.54 | 42.0 | 3.58e-01 | 95.9% | 49.5% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.54 | 43.0 | 3.47e-01 | 100.0% | 45.7% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.59e-01 | 93.9% | 52.3% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 42.0 | 3.45e-01 | 95.9% | 98.2% |
| 2kskA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.53 | 42.0 | 3.85e-01 | 95.9% | 66.2% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 41.0 | 3.63e-01 | 95.9% | 58.3% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 41.0 | 3.37e-01 | 98.0% | 71.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 39.0 | 3.74e-01 | 93.9% | 69.1% |
| 4c9yA00 | 1.10.10.1890 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like | 0.52 | 42.0 | 3.21e-01 | 91.8% | 100.0% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.47e-01 | 91.8% | 65.3% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.53e-01 | 93.9% | 57.5% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 39.0 | 3.05e-01 | 93.9% | 53.0% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.50 | 39.0 | 3.28e-01 | 89.8% | 53.2% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.50 | 39.0 | 3.59e-01 | 100.0% | 97.4% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 42.0 | 3.41e-01 | 93.9% | 51.6% |
| 1x9zA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.50 | 37.0 | 3.26e-01 | 91.8% | 49.4% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.39e-01 | 93.9% | 51.1% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4771134 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.71 | 56.0 | 5.45e-01 | 89.8% | 85.5% |
| 3976762 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.71 | 61.0 | 5.34e-01 | 100.0% | 94.7% |
| 4939498 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.69 | 53.0 | 4.88e-01 | 91.8% | 64.6% |
| 3971740 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.69 | 56.0 | 3.85e-01 | 95.9% | 31.9% |
| 3308870 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.68 | 51.0 | 5.36e-01 | 93.9% | 95.3% |
| 4934080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 54.0 | 3.93e-01 | 93.9% | 32.7% |
| 3602137 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.67 | 54.0 | 4.41e-01 | 95.9% | 47.4% |
| 4017316 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.67 | 56.0 | 3.85e-01 | 95.9% | 26.9% |
| 4603561 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.67 | 56.0 | 4.88e-01 | 100.0% | 88.7% |
| 1175882 | 304.154.1.1 ↗ | a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain › GGDEF_2 | 0.67 | 55.0 | 4.03e-01 | 100.0% | 54.2% |
| 4997133 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.66 | 51.0 | 4.28e-01 | 95.9% | 47.4% |
| 3795359 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.66 | 57.0 | 4.89e-01 | 100.0% | 100.0% |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.65 | 52.0 | 4.39e-01 | 93.9% | 51.1% |
| 3182652 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 50.0 | 4.44e-01 | 91.8% | 61.3% |
| 5067363 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.65 | 54.0 | 4.71e-01 | 98.0% | 100.0% |
| 5038088 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.65 | 52.0 | 4.85e-01 | 93.9% | 72.3% |
| 3056435 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.65 | 51.0 | 4.13e-01 | 95.9% | 43.6% |
| 5027689 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 49.0 | 4.25e-01 | 91.8% | 52.5% |
| 3206206 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 51.0 | 4.53e-01 | 91.8% | 64.0% |
| 3388102 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 50.0 | 4.70e-01 | 95.9% | 69.2% |
| 3346483 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 51.0 | 4.39e-01 | 93.9% | 57.6% |
| 3624413 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 52.0 | 4.84e-01 | 95.9% | 73.8% |
| 3611405 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 50.0 | 4.66e-01 | 93.9% | 67.7% |
| 4964616 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.64 | 48.0 | 4.60e-01 | 95.9% | 71.7% |
| 3683127 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 51.0 | 4.97e-01 | 91.8% | 87.3% |
| 4159102 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.63 | 52.0 | 4.76e-01 | 100.0% | 100.0% |
| 3260870 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 45.0 | 3.84e-01 | 95.9% | 44.4% |
| 3716821 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 51.0 | 4.49e-01 | 95.9% | 61.3% |
| 4608678 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 48.0 | 4.16e-01 | 91.8% | 53.8% |
| 4974457 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.62 | 49.0 | 3.34e-01 | 95.9% | 28.2% |
| 5051000 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.62 | 49.0 | 4.20e-01 | 89.8% | 53.0% |
| 3802901 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 49.0 | 4.35e-01 | 89.8% | 58.7% |
| 4992653 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 47.0 | 4.25e-01 | 95.9% | 60.0% |
| 3357746 | 304.12.1.8 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant | 0.61 | 49.0 | 4.53e-01 | 95.9% | 67.1% |
| 4438356 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.61 | 47.0 | 4.24e-01 | 95.9% | 60.0% |
| 3799570 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 3.52e-01 | 91.8% | 31.0% |
| 5056043 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.61 | 47.0 | 4.43e-01 | 91.8% | 69.2% |
| 4118694 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.60 | 50.0 | 4.50e-01 | 100.0% | 93.3% |
| 3367362 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.60 | 47.0 | 4.13e-01 | 89.8% | 55.0% |
| 5040129 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.60 | 50.0 | 4.13e-01 | 98.0% | 92.6% |
| 3424438 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.60 | 48.0 | 4.05e-01 | 100.0% | 76.0% |
| 3818197 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 47.0 | 4.26e-01 | 93.9% | 66.7% |
| 4976823 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.60 | 46.0 | 4.17e-01 | 93.9% | 60.0% |
| 4946891 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.60 | 43.0 | 3.93e-01 | 89.8% | 55.7% |
| 3877589 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.60 | 48.0 | 4.52e-01 | 89.8% | 73.3% |
| 4992190 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.60 | 50.0 | 4.55e-01 | 100.0% | 97.1% |
| 5052687 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.60 | 46.0 | 4.14e-01 | 89.8% | 58.7% |
| 4485008 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.59 | 46.0 | 3.21e-01 | 95.9% | 23.6% |
| 4118693 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 49.0 | 4.40e-01 | 100.0% | 93.3% |
| 5043257 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.59 | 48.0 | 4.51e-01 | 100.0% | 92.3% |
| 5314 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.59 | 50.0 | 4.17e-01 | 100.0% | 93.5% |
| 3494198 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.59 | 47.0 | 3.24e-01 | 93.9% | 27.9% |
| 3639594 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 43.0 | 4.15e-01 | 87.8% | 68.3% |
| 4474140 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.58 | 44.0 | 4.09e-01 | 95.9% | 64.6% |
| 3953208 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.58 | 48.0 | 4.03e-01 | 98.0% | 56.4% |
| 4610834 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.58 | 42.0 | 4.36e-01 | 93.9% | 93.3% |
| 1434556 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.58 | 44.0 | 4.11e-01 | 95.9% | 63.6% |
| 5082143 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.58 | 49.0 | 3.95e-01 | 100.0% | 85.7% |
| 5007807 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.58 | 48.0 | 4.02e-01 | 100.0% | 93.7% |
| 3969148 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.58 | 47.0 | 3.83e-01 | 98.0% | 50.5% |
| 4631988 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.58 | 44.0 | 3.13e-01 | 95.9% | 23.6% |
| 4322692 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.57 | 47.0 | 4.15e-01 | 100.0% | 95.0% |
| 4519248 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 45.0 | 4.56e-01 | 95.9% | 98.0% |
| 176932 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 44.0 | 3.11e-01 | 95.9% | 23.6% |
| 3988398 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.57 | 48.0 | 3.97e-01 | 98.0% | 90.5% |
| 4033306 | 2011.1.1.23 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › M20_dimer | 0.57 | 44.0 | 3.09e-01 | 95.9% | 23.6% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.57 | 46.0 | 3.91e-01 | 95.9% | 81.1% |
| 3600265 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 45.0 | 3.53e-01 | 91.8% | 58.3% |
| 4497244 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.57 | 45.0 | 4.13e-01 | 100.0% | 94.7% |
| 4092984 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.56 | 44.0 | 2.92e-01 | 95.9% | 20.0% |
| 3953647 | 304.26.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP | 0.56 | 46.0 | 3.88e-01 | 100.0% | 94.7% |
| 5079841 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.56 | 45.0 | 3.97e-01 | 93.9% | 58.7% |
| 4981719 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.56 | 42.0 | 3.97e-01 | 95.9% | 67.7% |
| 4996284 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.56 | 44.0 | 3.83e-01 | 98.0% | 84.4% |
| 4115819 | 304.48.1.48 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 | 0.56 | 43.0 | 3.16e-01 | 95.9% | 38.2% |
| 3532818 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.55 | 43.0 | 3.87e-01 | 95.9% | 61.3% |
| 4028358 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.55 | 45.0 | 3.82e-01 | 98.0% | 57.8% |
| 5036372 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.55 | 41.0 | 3.87e-01 | 93.9% | 64.6% |
| 3713330 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.54 | 43.0 | 3.42e-01 | 95.9% | 40.0% |
| 5036673 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.54 | 42.0 | 2.84e-01 | 93.9% | 20.5% |
| 4029151 | 320.2.1.0 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain | 0.54 | 40.0 | 3.83e-01 | 85.7% | 70.0% |
| 5060056 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.53 | 41.0 | 2.75e-01 | 93.9% | 23.6% |
| 3869516 | 327.11.2.56 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF28453 | 0.52 | 40.0 | 3.81e-01 | 93.9% | 73.8% |
| 3735235 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.71e-01 | 89.8% | 67.1% |
| 3216083 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.51 | 40.0 | 4.15e-01 | 95.9% | 97.8% |
| 3516321 | 4012.4.1.1 ↗ | a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins | 0.50 | 39.0 | 4.01e-01 | 95.9% | 97.8% |
D2
medium
residues 55-140
Domain cluster:
representative