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OR553915.1__WNN96093.1__SEA_NODIGI_2__00002
Bact-VirOR553915.1__WNN96093.1__SEA_NODIGI_2__00002
Identity
- Accession:
- OR553915 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 3077805
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-79
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4je3B00 | 3.10.20.720 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 31.0 | 3.11e-01 | 72.7% | 44.2% |
| 3cueC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 44.0 | 3.57e-01 | 83.1% | 40.6% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 3.29e-01 | 87.0% | 92.7% |
| 7s7rA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.09e-01 | 74.0% | 95.7% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.52 | 37.0 | 3.16e-01 | 77.9% | 94.4% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 30.0 | 2.89e-01 | 96.1% | 47.3% |
| 1xeuA02 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.55e-01 | 72.7% | 90.4% |
| 1k25B02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 2.86e-01 | 92.2% | 88.7% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.51 | 43.0 | 3.28e-01 | 94.8% | 93.5% |
| 1h6uA03 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.21e-01 | 72.7% | 72.8% |
| 3regA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 36.0 | 2.82e-01 | 81.8% | 34.5% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.50 | 44.0 | 2.95e-01 | 97.4% | 83.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4860339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 36.0 | 3.45e-01 | 70.1% | 44.9% |
| 3266052 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.58 | 34.0 | 2.81e-01 | 83.1% | 31.0% |
| 4444422 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 39.0 | 3.34e-01 | 70.1% | 100.0% |
| 3255418 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.55 | 45.0 | 2.91e-01 | 90.9% | 72.2% |
| 3740450 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.54 | 36.0 | 3.43e-01 | 79.2% | 56.7% |
| 5050858 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 38.0 | 2.88e-01 | 74.0% | 36.3% |
| 4344712 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.53 | 35.0 | 3.23e-01 | 100.0% | 52.0% |
| 5051456 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 37.0 | 2.87e-01 | 75.3% | 36.8% |
| 3488421 | 210.1.2.6 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B | 0.52 | 39.0 | 2.71e-01 | 81.8% | 43.5% |
| 3912477 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.52 | 44.0 | 2.98e-01 | 98.7% | 53.4% |
| 4984061 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 36.0 | 2.50e-01 | 75.3% | 63.6% |
| 4972532 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.51 | 37.0 | 3.56e-01 | 76.6% | 98.9% |
| 3701672 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.51 | 40.0 | 3.17e-01 | 87.0% | 63.5% |
| 1815422 | 566.1.1.3 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Pneumo_ncap | 0.51 | 40.0 | 2.99e-01 | 89.6% | 94.1% |
| 5049862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 34.0 | 2.72e-01 | 71.4% | 47.4% |