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OR574845.1__WQZ00106.1__CS5676_0038__00037
Bact-VirOR574845.1__WQZ00106.1__CS5676_0038__00037
Identity
- Accession:
- OR574845 ↗
- Kingdom:
- phage
Quality
75.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-83
Domain cluster:
rep: KU640380.1__AMQ66523.1__X__00041__D3-78
D2
high
residues 95-182
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00014__D3-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09652.17 best | Cas_VVA1548 | 28.4 | 2.00e-06 | 90.9% | 70.3% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j6bA00 | 3.40.50.11170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein PF08960, DUF1874 | 0.74 | 56.0 | 5.22e-01 | 98.9% | 65.1% |
| 1zmtA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 57.0 | 4.17e-01 | 95.5% | 91.7% |
| 4cu2A00 | 3.40.50.12090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 50.0 | 5.27e-01 | 90.9% | 91.3% |
| 3ftdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 54.0 | 4.37e-01 | 98.9% | 84.7% |
| 1qyrA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 54.0 | 4.28e-01 | 97.7% | 85.9% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 55.0 | 4.48e-01 | 100.0% | 88.2% |
| 4azsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 54.0 | 4.09e-01 | 98.9% | 70.8% |
| 2ld4A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 54.0 | 4.37e-01 | 100.0% | 93.6% |
| 2iksB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 53.0 | 4.21e-01 | 96.6% | 83.0% |
| 6ifsB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 52.0 | 4.07e-01 | 96.6% | 82.4% |
| 1fg7A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 51.0 | 3.93e-01 | 94.3% | 63.9% |
| 3futA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 52.0 | 4.10e-01 | 100.0% | 77.9% |
| 3fzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 53.0 | 4.07e-01 | 97.7% | 73.5% |
| 1yqgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 4.29e-01 | 94.3% | 89.3% |
| 2i9iA00 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.60 | 51.0 | 3.90e-01 | 97.7% | 85.5% |
| 2po3A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 49.0 | 3.78e-01 | 94.3% | 57.9% |
| 1e8cA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.59 | 48.0 | 3.61e-01 | 92.0% | 91.2% |
| 4kigA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 50.0 | 4.04e-01 | 95.5% | 98.9% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 51.0 | 4.07e-01 | 97.7% | 72.7% |
| 3dfzB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 51.0 | 4.51e-01 | 95.5% | 76.0% |
| 2avnA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.45e-01 | 89.8% | 84.6% |
| 4gudB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.58 | 51.0 | 3.91e-01 | 97.7% | 84.6% |
| 4h0nA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 49.0 | 3.86e-01 | 96.6% | 84.3% |
| 3m2tB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 50.0 | 3.97e-01 | 95.5% | 78.7% |
| 2j6lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 47.0 | 3.31e-01 | 94.3% | 46.3% |
| 4h4dA02 | 3.40.50.11270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 44.0 | 4.37e-01 | 86.4% | 93.8% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 50.0 | 4.28e-01 | 100.0% | 92.9% |
| 1qp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 3.78e-01 | 95.5% | 71.3% |
| 6iheA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.16e-01 | 98.9% | 93.6% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.55 | 44.0 | 3.26e-01 | 90.9% | 62.0% |
| 4a8jF00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.22e-01 | 95.5% | 83.2% |
| 3q2iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.62e-01 | 95.5% | 92.0% |
| 3luyA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 35.0 | 3.68e-01 | 92.0% | 82.4% |
| 1xt9A00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.51 | 40.0 | 3.14e-01 | 87.5% | 71.2% |
| 1edzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 44.0 | 3.71e-01 | 98.9% | 70.5% |
| 1gep001 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.51 | 45.0 | 3.63e-01 | 100.0% | 56.3% |
| 3bb8A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 42.0 | 3.04e-01 | 96.6% | 42.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5021985 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.71 | 62.0 | 3.89e-01 | 97.7% | 86.0% |
| 5077023 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.68 | 56.0 | 4.59e-01 | 90.9% | 91.5% |
| 3967801 | 2006.1.3.16 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF1835 | 0.66 | 58.0 | 4.64e-01 | 100.0% | 81.6% |
| 4988071 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.65 | 56.0 | 4.25e-01 | 96.6% | 84.8% |
| 3742392 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.62 | 54.0 | 3.87e-01 | 96.6% | 74.2% |
| 5053540 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.62 | 54.0 | 4.05e-01 | 96.6% | 83.0% |
| 4156844 | 2007.1.1.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HTS | 0.62 | 52.0 | 3.67e-01 | 96.6% | 86.7% |
| 4399029 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.62 | 52.0 | 3.41e-01 | 94.3% | 39.5% |
| 4388850 | 2007.1.1.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HTS | 0.62 | 53.0 | 3.72e-01 | 98.9% | 88.2% |
| 5029000 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.61 | 54.0 | 4.47e-01 | 98.9% | 82.5% |
| 2793608 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.60 | 52.0 | 4.20e-01 | 96.6% | 85.6% |
| 4156212 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.59 | 52.0 | 4.28e-01 | 100.0% | 80.6% |
| 1193319 | 7577.1.1.6 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › DegT_DnrJ_EryC1 | 0.59 | 49.0 | 3.61e-01 | 94.3% | 49.0% |
| 3884920 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.59 | 49.0 | 4.09e-01 | 93.2% | 71.9% |
| 4989916 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.59 | 48.0 | 3.79e-01 | 88.6% | 75.1% |
| 4032169 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.59 | 53.0 | 4.97e-01 | 96.6% | 91.4% |
| 4109564 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 49.0 | 3.94e-01 | 94.3% | 85.4% |
| 4958290 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.59 | 50.0 | 3.46e-01 | 95.5% | 86.7% |
| 4091094 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.59 | 51.0 | 4.69e-01 | 94.3% | 85.2% |
| 4672348 | 2003.1.12.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › UDPG/MGDP dehydrogenase C-terminal domain › SRR1 | 0.58 | 49.0 | 3.88e-01 | 94.3% | 82.1% |
| 2073556 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.58 | 48.0 | 3.80e-01 | 94.3% | 43.8% |
| 3451388 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 46.0 | 3.30e-01 | 87.5% | 92.1% |
| 5078492 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.58 | 50.0 | 3.91e-01 | 98.9% | 44.9% |
| 3385947 | 2003.1.5.32 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 | 0.58 | 48.0 | 3.63e-01 | 93.2% | 63.2% |
| 5058129 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.57 | 50.0 | 3.73e-01 | 98.9% | 82.2% |
| 3823921 | 2003.1.5.140 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › IRX15_IRX15L_GXM | 0.57 | 49.0 | 3.52e-01 | 100.0% | 65.0% |
| 3481506 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.56 | 39.0 | 3.58e-01 | 71.6% | 78.3% |
| 4579881 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.56 | 46.0 | 3.87e-01 | 89.8% | 76.0% |
| 5080913 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.56 | 48.0 | 3.08e-01 | 100.0% | 43.0% |
| 3782043 | 2004.1.1.294 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 | 0.56 | 46.0 | 3.32e-01 | 96.6% | 77.7% |
| 3584678 | 2003.1.5.97 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_32 | 0.56 | 48.0 | 3.71e-01 | 96.6% | 82.8% |
| 3612183 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.55 | 41.0 | 4.23e-01 | 93.2% | 83.5% |
| 3772897 | 2004.5.1.2 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › Folliculin_C | 0.55 | 46.0 | 3.49e-01 | 96.6% | 42.2% |
| 3596401 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 37.0 | 3.23e-01 | 70.5% | 54.8% |
| 4147949 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 47.0 | 3.12e-01 | 100.0% | 91.7% |
| 3093458 | 7568.1.1.15 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_TopB1_SLF1 | 0.54 | 39.0 | 4.00e-01 | 94.3% | 79.8% |
| 4025497 | 2003.1.1.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Ldh_1_N | 0.54 | 48.0 | 4.09e-01 | 100.0% | 94.5% |
| 4020571 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.54 | 45.0 | 3.17e-01 | 93.2% | 68.3% |
| 1608379 | 2003.1.1.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_7 | 0.53 | 45.0 | 4.27e-01 | 94.3% | 86.7% |
| 3510793 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.52 | 45.0 | 3.25e-01 | 100.0% | 63.9% |
| 3275618 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.50 | 42.0 | 4.26e-01 | 98.9% | 93.3% |
D3
high
residues 188-340