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OR574845.1__WQZ00123.1__CS5676_0055__00054
Bact-VirOR574845.1__WQZ00123.1__CS5676_0055__00054
Identity
- Accession:
- OR574845 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-145
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 21.0 | 3.12e-01 | 96.5% | 57.6% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.63 | 40.0 | 4.37e-01 | 93.6% | 76.3% |
| 4bhrA00 | 3.30.1300.70 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.63 | 26.0 | 3.41e-01 | 77.3% | 66.7% |
| 7r8iA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 38.0 | 3.33e-01 | 91.5% | 42.9% |
| 3thxA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.57 | 35.0 | 3.41e-01 | 90.1% | 52.1% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.55 | 35.0 | 3.53e-01 | 77.3% | 63.8% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.54 | 33.0 | 3.67e-01 | 84.4% | 74.6% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 3.55e-01 | 72.3% | 69.7% |
| 1sz2B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 34.0 | 3.69e-01 | 75.2% | 74.2% |
| 5aj3K00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.54 | 38.0 | 3.95e-01 | 92.2% | 77.2% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.53 | 33.0 | 3.54e-01 | 76.6% | 71.7% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 34.0 | 4.01e-01 | 99.3% | 92.9% |
| 2hoeA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 37.0 | 3.68e-01 | 88.7% | 68.9% |
| 3r8eA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 35.0 | 3.54e-01 | 75.2% | 67.9% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 29.0 | 3.31e-01 | 95.7% | 72.2% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.50 | 37.0 | 3.72e-01 | 90.8% | 74.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1003930 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.66 | 29.0 | 3.89e-01 | 97.2% | 74.7% |
| 3658422 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.60 | 31.0 | 4.11e-01 | 73.8% | 93.3% |
| 3056107 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 34.0 | 3.86e-01 | 80.9% | 76.2% |
| 4447482 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.57 | 41.0 | 4.42e-01 | 95.7% | 86.7% |
| 4339297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 34.0 | 3.08e-01 | 88.7% | 43.1% |
| 3228567 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.56 | 37.0 | 3.73e-01 | 76.6% | 65.7% |
| 3311789 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.55 | 39.0 | 4.37e-01 | 93.6% | 94.5% |
| 3925663 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.55 | 35.0 | 3.25e-01 | 90.8% | 49.7% |
| 3215907 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 39.0 | 3.16e-01 | 75.2% | 37.4% |
| 3939156 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.55 | 34.0 | 3.07e-01 | 91.5% | 43.1% |
| 3931272 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 34.0 | 3.21e-01 | 90.8% | 48.0% |
| 4301284 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.55 | 39.0 | 4.15e-01 | 95.0% | 83.2% |
| 3327789 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.55 | 40.0 | 4.33e-01 | 89.4% | 90.8% |
| 3937782 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.54 | 34.0 | 3.25e-01 | 91.5% | 52.7% |
| 4150748 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 35.0 | 3.39e-01 | 93.6% | 56.9% |
| 3186436 | 2484.1.1.24 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 35.0 | 3.48e-01 | 77.3% | 60.6% |
| 3658162 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.53 | 38.0 | 3.99e-01 | 93.6% | 81.4% |
| 3413023 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 3.72e-01 | 90.1% | 74.3% |
| 4073461 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.51 | 38.0 | 3.48e-01 | 78.0% | 68.4% |
| 5006208 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.51 | 34.0 | 3.25e-01 | 91.5% | 55.8% |
| 3621125 | 3209.1.1.1 ↗ | a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e | 0.51 | 33.0 | 3.43e-01 | 85.8% | 68.9% |
| 5075804 | 2484.1.1.337 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR | 0.50 | 35.0 | 3.21e-01 | 81.6% | 53.0% |
D2
high
residues 527-634
Domain cluster:
rep: KU935715.1__AND75289.1__ME3_128__00128__D432-531
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14284.12 best | PcfJ | 80.3 | 2.10e-22 | 91.7% | 68.8% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.73 | 57.0 | 4.85e-01 | 82.4% | 70.0% |
| 4ks9B02 | 3.40.630.150 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Malonyl-CoA decarboxylase, catalytic domain | 0.70 | 56.0 | 4.14e-01 | 84.3% | 43.9% |
| 2ygwA02 | 3.40.630.150 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Malonyl-CoA decarboxylase, catalytic domain | 0.70 | 55.0 | 4.16e-01 | 84.3% | 45.2% |
| 2r7hB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 54.0 | 4.76e-01 | 82.4% | 66.7% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 59.0 | 5.05e-01 | 91.7% | 67.8% |
| 3tthB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 55.0 | 4.79e-01 | 84.3% | 66.5% |
| 1lrzA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 55.0 | 4.48e-01 | 85.2% | 48.7% |
| 3r96B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.68 | 56.0 | 4.83e-01 | 89.8% | 68.8% |
| 1p0hA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.68 | 54.0 | 3.99e-01 | 86.1% | 38.3% |
| 4ua3A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 53.0 | 4.50e-01 | 88.9% | 65.6% |
| 5hh1A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 52.0 | 4.27e-01 | 84.3% | 59.5% |
| 1cm0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 50.0 | 4.39e-01 | 82.4% | 67.3% |
| 2hqyA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 51.0 | 4.40e-01 | 84.3% | 66.1% |
| 1s3rA03 | 3.40.30.40 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Perfringolysin | 0.65 | 45.0 | 4.29e-01 | 72.2% | 96.1% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 50.0 | 4.55e-01 | 83.3% | 68.0% |
| 4ksaA01 | 3.40.630.180 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.64 | 50.0 | 4.50e-01 | 85.2% | 91.6% |
| 3efaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 50.0 | 4.52e-01 | 83.3% | 67.8% |
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 49.0 | 4.43e-01 | 84.3% | 64.4% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 48.0 | 4.41e-01 | 83.3% | 66.2% |
| 4iusA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 48.0 | 3.67e-01 | 85.2% | 39.7% |
| 7pk0A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 46.0 | 4.37e-01 | 84.3% | 70.8% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.58 | 37.0 | 4.22e-01 | 79.6% | 86.6% |
| 1f46B00 | 3.30.1400.10 | Alpha Beta › 2-Layer Sandwich › Cell Division Protein Zipa; Chain: A, › ZipA, C-terminal FtsZ-binding domain | 0.56 | 45.0 | 4.09e-01 | 93.5% | 65.7% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 32.0 | 3.39e-01 | 93.5% | 62.2% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.53 | 33.0 | 3.88e-01 | 70.4% | 93.2% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 36.0 | 3.15e-01 | 75.9% | 75.4% |
| 3ni8A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 44.0 | 4.04e-01 | 96.3% | 82.1% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 38.0 | 2.87e-01 | 80.6% | 93.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980302 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.79 | 71.0 | 6.07e-01 | 95.4% | 72.1% |
| 4978477 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.76 | 58.0 | 5.39e-01 | 84.3% | 64.4% |
| 5051023 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.74 | 61.0 | 5.92e-01 | 88.0% | 100.0% |
| 3688701 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.73 | 63.0 | 5.11e-01 | 93.5% | 59.3% |
| 3197481 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.73 | 62.0 | 5.13e-01 | 91.7% | 63.2% |
| 3270465 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.73 | 64.0 | 5.35e-01 | 96.3% | 67.6% |
| 5050586 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.72 | 56.0 | 5.25e-01 | 83.3% | 74.1% |
| 3607659 | 213.1.1.13 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MCD | 0.71 | 56.0 | 4.05e-01 | 84.3% | 41.3% |
| 3924544 | 213.1.1.81 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF7596 | 0.71 | 55.0 | 3.86e-01 | 84.3% | 26.6% |
| 5053614 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.70 | 54.0 | 4.83e-01 | 83.3% | 63.9% |
| 3798676 | 213.1.1.13 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MCD | 0.70 | 55.0 | 3.99e-01 | 84.3% | 41.7% |
| 3271300 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.69 | 54.0 | 4.62e-01 | 83.3% | 69.1% |
| 3357461 | 213.1.1.13 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MCD | 0.69 | 54.0 | 3.89e-01 | 84.3% | 38.1% |
| 4977502 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.69 | 56.0 | 4.79e-01 | 86.1% | 63.1% |
| 4019554 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.69 | 54.0 | 4.82e-01 | 84.3% | 77.4% |
| 4012435 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.69 | 54.0 | 4.76e-01 | 84.3% | 78.8% |
| 3938991 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.69 | 53.0 | 4.65e-01 | 83.3% | 66.7% |
| 3289107 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.68 | 53.0 | 4.65e-01 | 83.3% | 63.6% |
| 224018 | 213.1.1.13 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MCD | 0.68 | 53.0 | 3.88e-01 | 84.3% | 42.6% |
| 3689484 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.68 | 53.0 | 4.34e-01 | 83.3% | 73.2% |
| 4285086 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.68 | 55.0 | 4.20e-01 | 88.0% | 42.9% |
| 5072254 | 213.1.1.37 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 | 0.68 | 53.0 | 4.62e-01 | 85.2% | 58.0% |
| 4218863 | 213.1.1.21 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C | 0.67 | 53.0 | 4.16e-01 | 84.3% | 49.1% |
| 4964466 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.67 | 52.0 | 4.74e-01 | 84.3% | 61.4% |
| 3517752 | 213.1.1.37 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_18 | 0.66 | 52.0 | 4.50e-01 | 84.3% | 54.7% |
| 4291405 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.66 | 51.0 | 4.62e-01 | 83.3% | 60.7% |
| 4941377 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.66 | 53.0 | 4.70e-01 | 87.0% | 65.4% |
| 4958078 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.66 | 52.0 | 4.56e-01 | 83.3% | 63.3% |
| 3950345 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.66 | 51.0 | 4.37e-01 | 83.3% | 56.0% |
| 3946017 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.65 | 51.0 | 4.55e-01 | 83.3% | 65.4% |
| 4065996 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.65 | 38.0 | 3.55e-01 | 84.3% | 47.7% |
| 4350601 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.65 | 50.0 | 4.55e-01 | 83.3% | 69.3% |
| 3290842 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.64 | 50.0 | 4.30e-01 | 84.3% | 64.0% |
| 4273033 | 3894.1.1.2 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD | 0.64 | 37.0 | 3.54e-01 | 84.3% | 48.8% |
| 3794101 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.63 | 53.0 | 4.19e-01 | 89.8% | 58.6% |
| 3961980 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 47.0 | 4.43e-01 | 81.5% | 99.2% |
| 3791305 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 48.0 | 3.92e-01 | 85.2% | 45.9% |
| 3505140 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 48.0 | 4.20e-01 | 84.3% | 58.1% |
| 3569527 | 213.1.1.16 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 47.0 | 4.17e-01 | 85.2% | 57.0% |
| 3856485 | 213.1.1.16 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 46.0 | 3.96e-01 | 84.3% | 52.6% |
| 3925908 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.57 | 45.0 | 3.65e-01 | 89.8% | 43.8% |
| 5074996 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.57 | 48.0 | 4.11e-01 | 90.7% | 74.7% |
| 3894643 | 234.1.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases | 0.56 | 40.0 | 3.44e-01 | 73.1% | 55.9% |
| 3596980 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.56 | 46.0 | 3.67e-01 | 86.1% | 56.1% |
| 3614362 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.56 | 48.0 | 3.90e-01 | 90.7% | 76.4% |
| 3965262 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.55 | 37.0 | 3.90e-01 | 78.7% | 75.0% |
| 4024860 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 43.0 | 3.09e-01 | 85.2% | 50.3% |
| 4451173 | 331.3.1.18 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DAPG_hydrolase | 0.55 | 48.0 | 3.59e-01 | 98.1% | 46.2% |
| 3651664 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.53 | 42.0 | 2.86e-01 | 88.0% | 23.9% |
| 3822782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 36.0 | 2.57e-01 | 72.2% | 83.4% |
| 4618101 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.52 | 34.0 | 3.55e-01 | 92.6% | 72.0% |
| 5000800 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.52 | 33.0 | 3.68e-01 | 91.7% | 83.1% |
| 3389477 | 4205.1.1.0 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like | 0.51 | 44.0 | 3.73e-01 | 95.4% | 99.5% |
D3
medium
residues 146-168_229-307
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 52.0 | 4.02e-01 | 94.1% | 74.5% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 43.0 | 3.63e-01 | 77.5% | 59.2% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 50.0 | 3.80e-01 | 94.1% | 74.5% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 40.0 | 3.57e-01 | 75.5% | 71.4% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 41.0 | 2.57e-01 | 79.4% | 60.6% |
| 3k0zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 36.0 | 3.21e-01 | 78.4% | 46.3% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.54 | 43.0 | 3.23e-01 | 88.2% | 66.6% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.54 | 43.0 | 3.14e-01 | 87.3% | 35.7% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 43.0 | 3.23e-01 | 85.3% | 52.5% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 40.0 | 2.70e-01 | 82.4% | 34.2% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.68e-01 | 73.5% | 88.9% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.68e-01 | 77.5% | 25.1% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 3.29e-01 | 74.5% | 52.9% |
| 6zj8D01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 36.0 | 3.52e-01 | 82.4% | 64.9% |
| 2rgqB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.37e-01 | 73.5% | 67.7% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.50 | 37.0 | 3.31e-01 | 77.5% | 84.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987263 | 4321.1.1.3 ↗ | a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › PgdA_N | 0.66 | 45.0 | 3.53e-01 | 70.6% | 81.4% |
| 3970330 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.62 | 44.0 | 4.02e-01 | 74.5% | 59.3% |
| 5013525 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 42.0 | 3.90e-01 | 73.5% | 86.4% |
| 3429464 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.58 | 37.0 | 3.25e-01 | 72.5% | 41.8% |
| 4934641 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.57 | 42.0 | 2.84e-01 | 77.5% | 32.3% |
| 5077915 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.56 | 41.0 | 2.90e-01 | 77.5% | 38.8% |
| 3414415 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.56 | 49.0 | 3.92e-01 | 96.1% | 89.5% |
| 4457744 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.55 | 40.0 | 2.91e-01 | 77.5% | 40.3% |
| 5078865 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.55 | 44.0 | 4.05e-01 | 86.3% | 90.4% |
| 4974362 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 40.0 | 2.99e-01 | 75.5% | 80.2% |
| 5083094 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.55 | 42.0 | 3.12e-01 | 80.4% | 81.6% |
| 136970 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.55 | 36.0 | 3.21e-01 | 78.4% | 46.3% |
| 4330018 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.54 | 31.0 | 3.60e-01 | 75.5% | 77.3% |
| 4989642 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.54 | 40.0 | 2.85e-01 | 77.5% | 39.1% |
| 3234838 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.54 | 36.0 | 3.44e-01 | 73.5% | 57.5% |
| 4930368 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.54 | 37.0 | 3.68e-01 | 71.6% | 97.3% |
| 4952366 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.54 | 39.0 | 2.81e-01 | 77.5% | 46.7% |
| 4988603 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.54 | 39.0 | 2.84e-01 | 76.5% | 65.9% |
| 5055339 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.54 | 39.0 | 2.92e-01 | 76.5% | 84.8% |
| 3907198 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 44.0 | 3.51e-01 | 89.2% | 90.7% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.53 | 40.0 | 3.32e-01 | 77.5% | 65.9% |
| 3606414 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 39.0 | 3.12e-01 | 77.5% | 67.8% |
| 4029165 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 40.0 | 2.69e-01 | 81.4% | 21.2% |
| 3303119 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.53 | 38.0 | 3.50e-01 | 75.5% | 59.7% |
| 4955214 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.53 | 39.0 | 2.71e-01 | 77.5% | 33.3% |
| 3391001 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 42.0 | 3.34e-01 | 88.2% | 89.5% |
| 3789933 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.52 | 34.0 | 3.40e-01 | 70.6% | 63.8% |
| 3703973 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 45.0 | 4.19e-01 | 95.1% | 86.2% |
| 4952182 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 36.0 | 3.53e-01 | 71.6% | 78.2% |
| 5033005 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.48e-01 | 79.4% | 89.2% |
| 5071365 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 40.0 | 2.81e-01 | 87.3% | 59.2% |
| 4975736 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 41.0 | 2.88e-01 | 89.2% | 56.2% |
| 5041222 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.50 | 39.0 | 3.60e-01 | 89.2% | 64.6% |
| 3931097 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.50 | 41.0 | 3.47e-01 | 93.1% | 98.4% |
D4
medium
residues 169-228
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gmuA02 | 2.60.260.20 | Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain | 0.62 | 48.0 | 4.56e-01 | 85.0% | 81.7% |
| 2y8nB01 | 2.20.70.100 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 36.0 | 4.18e-01 | 75.0% | 85.7% |
| 6ixwB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 42.0 | 3.25e-01 | 90.0% | 99.4% |
| 2xvoB00 | 2.60.120.1670 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.22e-01 | 93.3% | 87.3% |
| 1z05A03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 45.0 | 3.37e-01 | 98.3% | 99.4% |
| 5eqxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 41.0 | 3.53e-01 | 88.3% | 100.0% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 3.61e-01 | 81.7% | 91.3% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 3.70e-01 | 98.3% | 100.0% |
| 4am6A03 | 3.30.420.580 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 41.0 | 2.82e-01 | 98.3% | 95.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5016027 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 51.0 | 4.52e-01 | 93.3% | 73.3% |
| 4389834 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.57 | 47.0 | 3.51e-01 | 98.3% | 91.4% |
| 3608377 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 40.0 | 3.85e-01 | 76.7% | 84.3% |
| 141877 | 810.1.1.6 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › Cmr7b-like | 0.55 | 43.0 | 3.25e-01 | 95.0% | 86.4% |
| 3936714 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.55 | 45.0 | 3.59e-01 | 100.0% | 85.5% |
| 3506230 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 39.0 | 2.76e-01 | 81.7% | 46.2% |
| 1102610 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 44.0 | 3.75e-01 | 100.0% | 94.6% |
| 3769638 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.51 | 42.0 | 2.54e-01 | 100.0% | 20.0% |
| 4000532 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.50 | 35.0 | 3.25e-01 | 76.7% | 90.6% |
D5
medium
residues 308-379
Domain cluster:
representative
D6
medium
residues 380-446
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.63 | 46.0 | 3.41e-01 | 77.6% | 68.2% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.51 | 38.0 | 3.13e-01 | 86.6% | 75.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3859287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.62 | 44.0 | 4.15e-01 | 100.0% | 62.5% |
| 4004184 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.56 | 47.0 | 3.96e-01 | 97.0% | 66.7% |
| 3271436 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.52 | 39.0 | 2.75e-01 | 82.1% | 95.0% |
| 3485333 | 601.42.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain › PLAC8 | 0.51 | 40.0 | 3.63e-01 | 100.0% | 61.1% |
D7
medium
residues 447-526
Domain cluster:
rep: MK448964.1__QBX29559.1__Javan502_0037__00016__D280-339
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14284.12 best | PcfJ | 27.2 | 4.70e-06 | 68.8% | 31.9% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kyoF00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.72 | 37.0 | 3.91e-01 | 93.8% | 55.4% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.70 | 48.0 | 3.77e-01 | 71.2% | 36.7% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 47.0 | 4.44e-01 | 77.5% | 93.8% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 48.0 | 4.04e-01 | 81.2% | 80.7% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 34.0 | 3.52e-01 | 71.2% | 53.2% |
| 1oedA00 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.63 | 45.0 | 3.85e-01 | 75.0% | 78.0% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 54.0 | 4.20e-01 | 98.8% | 56.9% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 44.0 | 4.09e-01 | 80.0% | 99.0% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 48.0 | 4.01e-01 | 90.0% | 85.3% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 48.0 | 3.96e-01 | 92.5% | 97.9% |
| 1n1bB02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.56 | 45.0 | 3.16e-01 | 91.3% | 80.7% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.55 | 39.0 | 3.59e-01 | 82.5% | 55.0% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.55 | 37.0 | 3.78e-01 | 70.0% | 93.6% |
| 2wviA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 50.0 | 3.94e-01 | 100.0% | 51.2% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 37.0 | 3.84e-01 | 70.0% | 77.0% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.53 | 36.0 | 3.35e-01 | 70.0% | 63.8% |
| 7pbkA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.29e-01 | 97.5% | 78.4% |
| 2uvaJ10 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.51 | 39.0 | 3.21e-01 | 86.3% | 70.6% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.51 | 39.0 | 3.26e-01 | 83.7% | 85.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3302252 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.75 | 31.0 | 3.50e-01 | 80.0% | 49.2% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.71 | 40.0 | 3.96e-01 | 72.5% | 52.9% |
| 3436965 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.70 | 41.0 | 3.86e-01 | 100.0% | 49.5% |
| 3651184 | 4957.1.1.7 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › MOM1 | 0.64 | 44.0 | 4.56e-01 | 71.2% | 78.7% |
| 4431704 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.62 | 43.0 | 4.49e-01 | 71.2% | 100.0% |
| 3699443 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 44.0 | 3.82e-01 | 100.0% | 50.4% |
| 3407923 | 192.24.1.1 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical | 0.62 | 44.0 | 4.07e-01 | 100.0% | 59.0% |
| 4945751 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 41.0 | 3.67e-01 | 100.0% | 50.0% |
| 3397827 | 150.3.1.32 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Unpaired | 0.56 | 49.0 | 3.88e-01 | 100.0% | 64.0% |
| 4107080 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.56 | 50.0 | 3.05e-01 | 100.0% | 66.1% |
| 4110524 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.55 | 40.0 | 3.86e-01 | 80.0% | 92.6% |
| 3726230 | 2003.1.5.94 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF4470 | 0.51 | 44.0 | 2.77e-01 | 95.0% | 47.3% |
| 4974997 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.50 | 38.0 | 4.14e-01 | 81.2% | 98.5% |