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OR575930.1__WOZ57568.1__X__00157

Bact-Vir

OR575930.1__WOZ57568.1__X__00157

Identity

Accession:
OR575930 ↗
Kingdom:
phage

Quality

90.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Chemalvirus› Pseudomonas_phage_vB_PseuGesM_254

TaxID: 3092638

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-49
PDB
Domain cluster: rep: HQ615693.1__AEC53196.1__SCRM01_250__00250__D4-55
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 81.0 6.69e-01 100.0% 81.5%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 77.0 6.46e-01 100.0% 85.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.83 68.0 6.76e-01 89.6% 98.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 6.42e-01 97.9% 100.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 69.0 6.37e-01 97.9% 100.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 68.0 6.22e-01 97.9% 95.5%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 70.0 6.43e-01 97.9% 100.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 5.94e-01 100.0% 93.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 5.77e-01 100.0% 94.2%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.73 62.0 3.82e-01 100.0% 41.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.29e-01 97.9% 90.7%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.71 51.0 5.38e-01 77.1% 100.0%
4fdyA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.68 57.0 4.25e-01 100.0% 47.8%
4bt2A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.65 55.0 4.27e-01 100.0% 46.5%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 54.0 4.10e-01 100.0% 48.8%
3gt2A00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 55.0 4.07e-01 100.0% 40.7%
2xveA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 48.0 3.81e-01 83.3% 99.0%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.63 52.0 4.14e-01 100.0% 46.8%
1zs7A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.61 44.0 3.51e-01 79.2% 98.1%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.60 45.0 3.82e-01 87.5% 60.7%
2c0nA00 3.90.550.40 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.60 46.0 3.14e-01 87.5% 90.5%
3h8lA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 44.0 3.14e-01 81.2% 96.0%
5nmxB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 43.0 3.56e-01 81.2% 98.9%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 3.85e-01 100.0% 99.1%
1o67C00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.58 49.0 3.24e-01 100.0% 69.0%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 47.0 3.98e-01 100.0% 93.3%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.51e-01 100.0% 91.2%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 3.53e-01 93.8% 100.0%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.45e-01 100.0% 94.0%
4iq0C02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 40.0 2.79e-01 81.2% 71.8%
4eqsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 46.0 3.36e-01 97.9% 84.6%
1q74B00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.55 42.0 2.67e-01 87.5% 63.5%
4bzyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.31e-01 89.6% 78.8%
6kghA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 41.0 2.79e-01 87.5% 29.9%
7x4qA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 41.0 2.95e-01 87.5% 96.7%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.48e-01 85.4% 72.1%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.52 40.0 3.44e-01 91.7% 91.1%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.52 41.0 3.18e-01 100.0% 93.4%
1yfsA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 40.0 2.60e-01 85.4% 69.5%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 39.0 3.21e-01 95.8% 81.8%
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.51 43.0 3.15e-01 100.0% 68.8%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.92 76.0 7.26e-01 89.6% 92.7%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.87 77.0 6.85e-01 95.8% 92.3%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 73.0 6.94e-01 91.7% 94.5%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 71.0 6.80e-01 89.6% 94.5%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.86 70.0 6.73e-01 89.6% 96.4%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 71.0 6.81e-01 91.7% 96.4%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.85 74.0 6.67e-01 95.8% 93.8%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.85 72.0 6.51e-01 93.8% 90.8%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.85 74.0 6.44e-01 95.8% 85.7%
4077367 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.84 75.0 6.76e-01 100.0% 100.0%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.84 74.0 6.68e-01 100.0% 98.5%
3212772 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.83 67.0 5.82e-01 89.6% 83.8%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.83 74.0 6.65e-01 100.0% 98.5%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.83 72.0 6.52e-01 97.9% 96.9%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.83 72.0 6.55e-01 97.9% 96.9%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.83 73.0 6.60e-01 100.0% 98.5%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.83 72.0 6.49e-01 97.9% 96.9%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.82 72.0 6.51e-01 97.9% 96.9%
4345080 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.82 72.0 6.57e-01 100.0% 98.5%
4101580 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.81 72.0 6.55e-01 100.0% 98.5%
4292289 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.81 72.0 6.53e-01 100.0% 98.5%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.81 72.0 6.53e-01 100.0% 98.5%
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.81 70.0 6.39e-01 100.0% 98.5%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.80 69.0 6.28e-01 100.0% 98.5%
5005813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.61e-01 95.8% 92.0%
4327595 4.1.1.402 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2761 0.77 65.0 5.32e-01 100.0% 75.8%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.76 64.0 5.77e-01 100.0% 92.9%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.96e-01 91.7% 97.8%
3466927 4.2.1.4 ↗ beta barrels › SH3 › SAND › SAND › TDBD 0.70 57.0 4.67e-01 91.7% 84.4%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.70 56.0 4.92e-01 97.9% 80.0%
3284393 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.64 54.0 4.07e-01 100.0% 42.6%
3839768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 47.0 2.83e-01 85.4% 16.3%
185920 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.60 46.0 3.14e-01 87.5% 90.1%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.27e-01 89.6% 94.8%
3302832 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 46.0 3.19e-01 87.5% 88.2%
4990662 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.58 49.0 2.94e-01 100.0% 36.1%
5077659 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.58 46.0 3.64e-01 93.8% 80.9%
1948726 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 44.0 2.74e-01 85.4% 56.2%
3605154 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 44.0 2.59e-01 87.5% 32.3%
3690077 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 46.0 2.92e-01 93.8% 34.0%
5029394 209.1.1.0 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.57 46.0 3.11e-01 100.0% 84.7%
3729873 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 46.0 3.00e-01 93.8% 100.0%
3479602 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 43.0 2.82e-01 85.4% 68.6%
3422023 2003.1.2.111 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Lys_Orn_oxgnase 0.56 48.0 3.24e-01 97.9% 95.1%
4205152 4.8.1.46 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Cuticle_1 0.56 41.0 4.07e-01 81.2% 100.0%
3275134 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 47.0 2.77e-01 100.0% 50.1%
None — 0.55 47.0 3.20e-01 97.9% 95.6%
3723968 2003.1.2.65 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Pyr_redox_3 0.55 45.0 2.65e-01 93.8% 32.7%
3961797 2003.1.2.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.55 44.0 2.67e-01 93.8% 54.9%
3659256 2003.1.2.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.55 46.0 3.75e-01 97.9% 97.9%
3287157 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.55 45.0 2.60e-01 95.8% 39.6%
3663391 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 47.0 2.72e-01 100.0% 48.4%
4931637 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 43.0 3.32e-01 89.6% 95.7%
3950238 7567.1.1.1 ↗ a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.54 41.0 2.60e-01 89.6% 83.9%
3960690 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 46.0 3.36e-01 100.0% 95.2%
3960797 7567.1.1.1 ↗ a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.54 39.0 2.70e-01 85.4% 20.5%
3628100 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.54 37.0 2.35e-01 75.0% 13.0%
3375066 2003.1.2.128 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FMO-like, Pyr_redox_3 0.54 46.0 3.15e-01 97.9% 95.6%
3450020 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.54 45.0 2.72e-01 100.0% 38.0%
3194816 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 44.0 2.81e-01 100.0% 94.6%
4953043 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 43.0 3.15e-01 95.8% 72.3%
4938719 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 44.0 2.68e-01 97.9% 37.7%
3287570 2003.1.2.111 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Lys_Orn_oxgnase 0.53 44.0 3.09e-01 97.9% 98.3%
3510483 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 43.0 3.17e-01 97.9% 100.0%
4355043 243.1.1.76 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF25976 0.50 38.0 3.11e-01 91.7% 95.5%