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OR575930.1__WOZ57589.1__X__00178

Bact-Vir

OR575930.1__WOZ57589.1__X__00178

Identity

Accession:
OR575930 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Chemalvirus› Pseudomonas_phage_vB_PseuGesM_254

TaxID: 3092638

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-98
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 49.0 3.43e-01 87.0% 81.1%
2qzbA00 2.60.460.10 Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain 0.63 40.0 2.91e-01 87.0% 23.4%
3regA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 51.0 3.67e-01 94.4% 84.8%
6pqmA01 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.62 44.0 4.27e-01 96.3% 66.7%
3c5cB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 49.0 3.55e-01 94.4% 86.8%
1u8zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 48.0 3.56e-01 94.4% 84.8%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 45.0 3.85e-01 83.3% 76.9%
1nltA03 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.59 43.0 3.82e-01 79.6% 79.3%
2ztbA03 2.60.40.3040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 39.0 4.05e-01 88.9% 77.1%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.59 39.0 4.16e-01 88.9% 84.1%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 3.11e-01 87.0% 45.2%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.58 41.0 3.74e-01 88.9% 54.9%
2q2gB02 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.57 42.0 3.73e-01 79.6% 93.7%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 43.0 3.52e-01 85.2% 82.0%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 34.0 3.25e-01 88.9% 45.5%
6jmgB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 3.33e-01 96.3% 87.3%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.50e-01 100.0% 47.3%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 44.0 3.00e-01 87.0% 46.4%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 41.0 2.57e-01 81.5% 32.9%
2kjpA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.55 38.0 3.43e-01 74.1% 69.6%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 42.0 2.73e-01 85.2% 45.4%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 3.46e-01 98.1% 57.4%
3aimA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 42.0 2.68e-01 85.2% 39.2%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.54 36.0 2.76e-01 96.3% 27.5%
5l2pA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 40.0 2.55e-01 81.5% 35.0%
3dmgA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 42.0 2.89e-01 87.0% 50.5%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 42.0 2.61e-01 88.9% 33.9%
1hfvA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 3.04e-01 90.7% 83.5%
3wj2B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 40.0 2.58e-01 85.2% 36.3%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 42.0 3.09e-01 88.9% 71.3%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 40.0 3.41e-01 100.0% 48.5%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.53 38.0 2.47e-01 81.5% 81.8%
3oesA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.10e-01 92.6% 84.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 3.59e-01 85.2% 70.1%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 2.91e-01 96.3% 81.4%
1z1yA01 2.90.20.10 Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain 0.51 36.0 2.66e-01 77.8% 71.8%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 38.0 2.68e-01 87.0% 32.8%
5di3B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 40.0 2.89e-01 100.0% 77.5%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.50 34.0 3.00e-01 98.1% 44.0%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621451 398.1.1.0 ↗ few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers 0.66 32.0 3.84e-01 81.5% 65.7%
3182052 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.64 52.0 3.23e-01 88.9% 38.3%
5082246 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 40.0 3.93e-01 87.0% 58.3%
4992408 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 38.0 4.11e-01 85.2% 73.3%
5006274 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.62 46.0 3.41e-01 79.6% 35.7%
4958339 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 45.0 3.71e-01 81.5% 80.9%
3955640 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 53.0 4.30e-01 100.0% 79.1%
3249895 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 48.0 4.46e-01 85.2% 98.6%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 40.0 3.92e-01 96.3% 60.0%
3673852 2004.1.1.548 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, Roc 0.61 50.0 3.35e-01 96.3% 70.2%
4975329 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.59 48.0 3.48e-01 96.3% 82.9%
4420315 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.58 36.0 3.79e-01 79.6% 68.0%
3929992 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 43.0 3.42e-01 100.0% 37.5%
3583262 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.58 49.0 4.15e-01 100.0% 61.1%
3246086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 3.60e-01 81.5% 60.0%
3832276 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.56 47.0 3.81e-01 100.0% 69.6%
3088529 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 45.0 3.48e-01 100.0% 55.2%
4000368 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 42.0 2.84e-01 87.0% 29.1%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 3.93e-01 87.0% 75.7%
3861907 3246.1.1.1 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR 0.54 40.0 3.29e-01 87.0% 86.7%
3848736 3246.1.1.1 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR 0.54 39.0 3.28e-01 87.0% 86.7%
3266052 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 39.0 3.02e-01 81.5% 92.4%
3906314 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.54 40.0 3.01e-01 85.2% 80.4%
3368126 5.1.5.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 0.54 41.0 2.71e-01 100.0% 18.5%
3607882 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.21e-01 88.9% 40.0%
2755266 3709.1.1.1 ↗ a+b two layers › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › ESX-1 secretion system protein eccB1 linker domains › T7SS_ESX1_EccB 0.53 32.0 3.51e-01 70.4% 81.6%
3782386 3628.1.1.0 ↗ a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit 0.53 39.0 2.84e-01 87.0% 40.0%
3563464 3246.1.1.1 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR 0.53 38.0 3.14e-01 87.0% 83.1%
3277617 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.32e-01 100.0% 44.8%
3627486 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 39.0 2.42e-01 87.0% 94.0%
2938507 9.2.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg 0.52 42.0 3.33e-01 92.6% 43.1%
3844846 2004.1.1.118 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.52 40.0 2.87e-01 94.4% 80.0%
3960994 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.52 45.0 2.80e-01 100.0% 25.7%
3592181 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.51 35.0 2.77e-01 100.0% 30.4%
4960942 11.1.4.21 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF3869 0.51 44.0 3.90e-01 100.0% 71.2%
3254628 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.51 39.0 2.84e-01 92.6% 82.1%
3879061 2004.1.1.118 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.51 41.0 2.80e-01 98.1% 69.6%