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OR576727.1__WNM70120.1__X__00027

Bact-Vir

OR576727.1__WNM70120.1__X__00027

Identity

Accession:
OR576727 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myxococcus_phage_Mx1

TaxID: 2994995

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-78
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1repC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.10e-01 90.3% 67.5%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.61 47.0 4.55e-01 87.1% 95.8%
3mdqA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.59 51.0 3.69e-01 100.0% 46.0%
2nraC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 3.71e-01 95.2% 70.0%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.98e-01 90.3% 92.9%
4a15A03 1.10.275.40 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › 0.55 45.0 3.63e-01 100.0% 95.7%
3r5dA01 3.30.70.2010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.63e-01 98.4% 67.4%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 4.08e-01 90.3% 92.5%
3ccfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 3.01e-01 96.8% 44.5%
4esjA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.83e-01 98.4% 93.3%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 41.0 3.64e-01 93.5% 85.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4535268 329.1.1.0 ↗ a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain 0.63 54.0 4.65e-01 98.4% 97.0%
2772480 101.1.2.16 ↗ alpha arrays › HTH › HTH › winged helix domain › Rep3_N 0.63 50.0 4.05e-01 90.3% 66.7%
3608942 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 43.0 3.65e-01 75.8% 56.4%
3200309 2498.1.1.5 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N 0.59 49.0 2.84e-01 98.4% 32.0%
1944496 101.1.2.131 ↗ alpha arrays › HTH › HTH › winged helix domain › RctB_central 0.59 46.0 3.96e-01 90.3% 86.2%
5079223 183.1.1.1 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.59 47.0 3.70e-01 93.5% 46.9%
3987881 101.1.2.76 ↗ alpha arrays › HTH › HTH › winged helix domain › CtsR 0.59 45.0 4.33e-01 87.1% 88.0%
3166713 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.57 44.0 3.46e-01 90.3% 52.7%
3198678 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 46.0 3.61e-01 96.8% 69.0%
4937533 3745.1.1.1 ↗ alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.56 46.0 3.01e-01 100.0% 65.1%
4943729 101.1.2.878 ↗ alpha arrays › HTH › HTH › winged helix domain › CTP-dep_RFKase 0.55 42.0 3.82e-01 90.3% 70.5%
2388794 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 44.0 3.54e-01 93.5% 46.3%
3725744 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.02e-01 90.3% 77.5%
4104199 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.55 40.0 3.59e-01 82.3% 97.9%
4227858 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.54 43.0 3.46e-01 93.5% 45.0%
4986382 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.89e-01 87.1% 85.5%
4325382 3018.1.1.0 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.53 40.0 3.42e-01 88.7% 96.5%
3208930 101.1.2.119 ↗ alpha arrays › HTH › HTH › winged helix domain › Tau95 0.52 42.0 3.03e-01 100.0% 36.6%
None — 0.52 43.0 3.94e-01 100.0% 90.0%
4623762 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.52 40.0 3.50e-01 87.1% 94.0%
3907369 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 43.0 4.18e-01 98.4% 100.0%
4439804 101.1.2.546 ↗ alpha arrays › HTH › HTH › winged helix domain › Methyltransf_2 0.52 41.0 2.59e-01 93.5% 15.6%
4018299 2498.1.1.5 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N 0.51 40.0 2.32e-01 90.3% 44.8%