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OR576727.1WNM70332.1X__00239

Bact-Vir

OR576727.1__WNM70332.1__X__00239

Identity

Accession:: OR576727 ↗
Kingdom:: phage

Quality

79.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myxococcus_phage_Mx1

TaxID: 2994995

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-85_199-272

PDB

Domain cluster: representative

CATH (17)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	37.0	4.34e-01	98.0%	78.9%
3kdqA00	6.10.320.10	Special › Helix non-globular › Ferritin ›	0.61	36.0	3.66e-01	100.0%	59.2%
1xg2B00	1.20.140.40	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein	0.60	38.0	3.81e-01	84.2%	62.3%
3aeiA00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	35.0	4.48e-01	96.7%	100.0%
6tmfI00	1.10.455.10	Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5	0.57	40.0	3.61e-01	71.7%	100.0%
2zdiB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.55	38.0	4.49e-01	95.4%	100.0%
7utzR02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.55	45.0	3.74e-01	88.8%	59.7%
8b70A01	1.20.1740.10	Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I	0.54	42.0	3.09e-01	81.6%	92.6%
3ucaA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.53	43.0	3.50e-01	85.5%	70.1%
3u1nB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.53	42.0	3.31e-01	84.9%	48.8%
2p92A00	3.30.70.1490	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp	0.52	25.0	3.04e-01	95.4%	69.5%
6xxvC00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.51	29.0	3.28e-01	96.1%	73.0%
3unvA02	1.20.200.10	Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain)	0.50	43.0	3.42e-01	92.8%	70.3%
2e87A01	1.20.120.1190	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.50	36.0	3.57e-01	72.4%	73.1%
1egdA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.50	42.0	4.37e-01	94.7%	96.5%
3kraC00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.50	40.0	3.35e-01	85.5%	70.8%
4zajA01	3.30.1360.70	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain	0.50	28.0	3.35e-01	80.3%	83.2%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5004297	4275.1.1.0 ↗	alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like	0.83	56.0	6.74e-01	83.6%	99.0%
4112182	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.64	37.0	4.21e-01	98.7%	73.7%
3394225	192.2.1.1 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2	0.63	36.0	4.17e-01	98.7%	75.7%
3630462	192.2.1.2 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin	0.62	37.0	3.87e-01	97.4%	65.0%
3989015	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	26.0	3.01e-01	71.7%	58.1%
5025448	1075.1.1.3 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2	0.57	39.0	3.25e-01	70.4%	77.5%
4074261	101.1.2.88 ↗	alpha arrays › HTH › HTH › winged helix domain › Dimerisation	0.56	28.0	2.90e-01	84.9%	50.0%
4882475	210.1.1.0 ↗	a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits	0.54	26.0	3.27e-01	77.6%	76.7%
4965147	5001.1.1.292 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM	0.53	42.0	3.67e-01	83.6%	63.4%
4490186	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.53	43.0	3.41e-01	90.1%	56.2%
4599664	7015.1.1.0 ↗	alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain	0.52	41.0	3.71e-01	82.2%	69.5%
3471757	192.29.1.140 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Frag1	0.51	33.0	3.42e-01	71.7%	66.9%
3227841	5001.1.1.33 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh	0.51	44.0	3.58e-01	96.7%	60.6%

D2 high residues 89-195

PDB

Domain cluster: rep: OP628076.1__WAB25257.1__M5_0079__00078__D54-154

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4wz9A01	2.60.40.1730	Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain	0.68	48.0	3.77e-01	100.0%	36.0%
2epbA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.56	19.0	2.42e-01	79.4%	44.1%
7wsoA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	35.0	3.86e-01	91.6%	83.5%
1hkfA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	41.0	4.15e-01	95.3%	85.2%
2b5iC01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	37.0	3.84e-01	100.0%	83.3%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3402496	4081.1.1.5 ↗	beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N	0.72	50.0	3.85e-01	100.0%	33.8%
3402927	4081.1.1.5 ↗	beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N	0.66	48.0	3.88e-01	100.0%	38.6%
4386724	1137.1.1.0 ↗	a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain	0.56	36.0	3.60e-01	99.1%	62.7%
3554985	929.1.1.4 ↗	beta duplicates or obligate multimers › Resistin › Resistin › Resistin › PCSK9_C2	0.54	35.0	4.02e-01	100.0%	93.3%
3927559	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	39.0	3.96e-01	100.0%	81.0%
3864261	11.10.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like	0.52	46.0	4.23e-01	99.1%	89.7%
4930538	206.1.3.12 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL	0.52	37.0	2.73e-01	99.1%	24.6%
5075402	210.1.3.3 ↗	a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4	0.51	36.0	2.69e-01	100.0%	27.4%
3756662	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.51	44.0	4.13e-01	100.0%	91.4%
4938062	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.50	40.0	4.01e-01	100.0%	84.5%