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OR576727.1__WNM70336.1__X__00243
Bact-VirOR576727.1__WNM70336.1__X__00243
Identity
- Accession:
- OR576727 ↗
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-126_205-241
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.73 | 41.0 | 5.35e-01 | 91.0% | 100.0% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.69 | 46.0 | 5.50e-01 | 89.6% | 100.0% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.68 | 50.0 | 5.60e-01 | 95.8% | 95.7% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.64 | 44.0 | 4.98e-01 | 93.8% | 93.6% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.57 | 38.0 | 3.82e-01 | 100.0% | 66.2% |
| 2k78A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 31.0 | 3.32e-01 | 93.1% | 61.1% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 38.0 | 4.08e-01 | 92.4% | 82.9% |
| 2i6gB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 34.0 | 3.07e-01 | 100.0% | 48.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.71 | 54.0 | 5.69e-01 | 100.0% | 86.4% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.70 | 51.0 | 5.71e-01 | 97.9% | 97.3% |
| 169594 | 1.1.13.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF3599 | 0.68 | 50.0 | 5.60e-01 | 95.8% | 95.7% |
| 5082328 | 1.1.13.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join_3 | 0.67 | 44.0 | 5.29e-01 | 91.0% | 100.0% |
| 4352127 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.58 | 41.0 | 3.39e-01 | 93.8% | 40.7% |
| 3827771 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.58 | 26.0 | 3.19e-01 | 95.8% | 64.7% |
| 5006840 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.53 | 36.0 | 3.80e-01 | 70.8% | 76.7% |
| 3412320 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 45.0 | 3.55e-01 | 91.0% | 89.3% |
| 4939497 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.52 | 36.0 | 3.81e-01 | 72.2% | 80.0% |
| 3941292 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 29.0 | 3.30e-01 | 70.8% | 70.9% |
| 3209918 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.51 | 28.0 | 3.08e-01 | 77.8% | 64.5% |
D2
high
residues 130-202
Domain cluster:
rep: IMGVR_UViG_3300021507_000104-3300021507-Ga0190316_10029762__D143-207
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 51.0 | 4.68e-01 | 100.0% | 97.1% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.58 | 50.0 | 4.10e-01 | 100.0% | 60.3% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.46e-01 | 91.8% | 88.2% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 3.33e-01 | 100.0% | 83.4% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 45.0 | 3.36e-01 | 100.0% | 71.9% |
| 1xe7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 48.0 | 3.60e-01 | 100.0% | 52.2% |
| 1mkfA01 | 2.60.40.1330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 3.46e-01 | 100.0% | 47.7% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 3.79e-01 | 83.6% | 85.3% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.16e-01 | 100.0% | 88.1% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.53 | 42.0 | 4.33e-01 | 100.0% | 92.6% |
| 4jb9H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 3.79e-01 | 98.6% | 82.4% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.10e-01 | 100.0% | 87.0% |
| 7zkpA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.52 | 43.0 | 3.38e-01 | 100.0% | 72.3% |
| 4n2oA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.30e-01 | 100.0% | 48.7% |
| 1cqkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.94e-01 | 100.0% | 88.1% |
| 4jfhE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.75e-01 | 98.6% | 80.9% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.77e-01 | 97.3% | 83.0% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.79e-01 | 100.0% | 85.2% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.81e-01 | 100.0% | 86.7% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.83e-01 | 100.0% | 86.5% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959701 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.68 | 54.0 | 4.23e-01 | 100.0% | 40.0% |
| 2869337 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.67 | 54.0 | 3.78e-01 | 100.0% | 27.0% |
| 4946447 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 57.0 | 5.38e-01 | 98.6% | 88.9% |
| 4873531 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.62 | 46.0 | 3.57e-01 | 100.0% | 33.5% |
| 4372074 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.62 | 54.0 | 4.42e-01 | 100.0% | 72.1% |
| 3246291 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.61 | 48.0 | 4.06e-01 | 86.3% | 95.2% |
| 5045644 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.61 | 53.0 | 4.10e-01 | 100.0% | 47.6% |
| 3927343 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.61 | 52.0 | 3.50e-01 | 100.0% | 27.6% |
| 3490918 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.60 | 52.0 | 4.54e-01 | 100.0% | 75.7% |
| 4001416 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.60 | 50.0 | 4.84e-01 | 97.3% | 94.1% |
| 3385472 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.86e-01 | 100.0% | 100.0% |
| 4530004 | 11.1.1.1125 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30142 | 0.59 | 51.0 | 4.32e-01 | 97.3% | 90.4% |
| 3926311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 52.0 | 4.57e-01 | 100.0% | 73.6% |
| 5042583 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.58 | 51.0 | 4.73e-01 | 100.0% | 78.9% |
| 4932638 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 51.0 | 4.16e-01 | 100.0% | 57.1% |
| 3972567 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.58 | 50.0 | 4.75e-01 | 100.0% | 90.0% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.58 | 49.0 | 4.47e-01 | 100.0% | 88.6% |
| 3906085 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.57 | 47.0 | 3.80e-01 | 100.0% | 52.9% |
| 3756664 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.57 | 49.0 | 3.79e-01 | 100.0% | 55.4% |
| 3477455 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 47.0 | 3.92e-01 | 98.6% | 87.6% |
| 4931334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.18e-01 | 94.5% | 79.0% |
| 3262556 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.55 | 47.0 | 4.33e-01 | 98.6% | 74.0% |
| 3740775 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 47.0 | 3.88e-01 | 98.6% | 84.3% |
| 3228358 | 10.32.1.258 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N | 0.55 | 48.0 | 4.46e-01 | 98.6% | 95.8% |
| 4020214 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.55 | 47.0 | 4.38e-01 | 100.0% | 93.7% |
| 1949032 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.55 | 45.0 | 3.36e-01 | 100.0% | 71.9% |
| 3322077 | 10.32.1.99 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Pga1 | 0.55 | 47.0 | 3.99e-01 | 100.0% | 86.2% |
| 3168670 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.55 | 47.0 | 3.44e-01 | 98.6% | 34.3% |
| 5033378 | 4182.1.1.1 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Propeptide_C25 | 0.54 | 47.0 | 3.75e-01 | 100.0% | 100.0% |
| 3491161 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 45.0 | 3.75e-01 | 100.0% | 59.3% |
| 1839958 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.54 | 46.0 | 4.00e-01 | 100.0% | 77.5% |
| 381239 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.54 | 47.0 | 3.47e-01 | 100.0% | 70.5% |
| 4025872 | 929.1.1.0 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin | 0.54 | 46.0 | 4.27e-01 | 98.6% | 87.4% |
| 4280499 | 929.1.1.3 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › PCSK9_C3 | 0.54 | 44.0 | 4.38e-01 | 100.0% | 87.5% |
| 3263969 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.06e-01 | 95.9% | 73.3% |
| 405110 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.53 | 36.0 | 2.97e-01 | 74.0% | 74.2% |
| 5053182 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.53 | 34.0 | 3.82e-01 | 86.3% | 89.1% |
| 3296271 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 39.0 | 3.01e-01 | 84.9% | 38.9% |
| 3801149 | 11.1.5.123 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3694 | 0.50 | 41.0 | 3.02e-01 | 95.9% | 67.0% |