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OR576727.1__WNM70344.1__X__00001
Bact-VirOR576727.1__WNM70344.1__X__00001
Identity
- Accession:
- OR576727 ↗
- Kingdom:
- phage
Quality
53.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 270-400
Domain cluster:
rep: NC_028850.1__YP_009203163.1__AVU16_gp07__00007__D5-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23780.2 best | S-AdoMet_lyase | 28.7 | 1.50e-06 | 87.8% | 79.0% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 34.0 | 4.37e-01 | 93.1% | 100.0% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.59 | 26.0 | 3.27e-01 | 100.0% | 68.0% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 30.0 | 3.56e-01 | 72.5% | 72.1% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.58 | 41.0 | 4.17e-01 | 90.1% | 73.3% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.48e-01 | 85.5% | 89.1% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 35.0 | 3.93e-01 | 71.0% | 83.0% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 32.0 | 3.79e-01 | 85.5% | 86.7% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.52 | 37.0 | 3.92e-01 | 96.9% | 81.4% |
| 1r21A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 30.0 | 3.37e-01 | 93.9% | 75.0% |
| 3cmbA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.51 | 39.0 | 3.15e-01 | 82.4% | 85.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058264 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 39.0 | 4.48e-01 | 87.0% | 90.4% |
| 4940870 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.60 | 37.0 | 4.46e-01 | 91.6% | 100.0% |
| 5068256 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.58 | 37.0 | 4.32e-01 | 90.1% | 96.5% |
| 143128 | 304.55.1.4 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › T_Ag_DNA_bind | 0.58 | 40.0 | 4.22e-01 | 87.0% | 79.0% |
| 4974971 | 304.12.1.17 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GYD | 0.58 | 39.0 | 4.45e-01 | 73.3% | 94.7% |
| 3214387 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 30.0 | 3.56e-01 | 75.6% | 74.4% |
| 1281177 | 304.9.1.35 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Hera_RBD | 0.54 | 32.0 | 3.79e-01 | 85.5% | 86.7% |
| 3704944 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 29.0 | 3.23e-01 | 96.2% | 66.0% |
| 3223629 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.53 | 22.0 | 2.73e-01 | 71.0% | 56.5% |
| 164541 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.52 | 37.0 | 3.92e-01 | 96.9% | 81.4% |
| 3655075 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.52 | 36.0 | 2.93e-01 | 93.9% | 34.7% |
| 4319487 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.52 | 43.0 | 4.08e-01 | 90.8% | 87.5% |
| 3500427 | 3914.1.1.2 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer | 0.51 | 46.0 | 2.86e-01 | 100.0% | 73.6% |
| 3505467 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 33.0 | 3.46e-01 | 92.4% | 72.2% |
D2
medium
residues 1-55