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OR576728.1__WNM70401.1__X__00057

Bact-Vir

OR576728.1__WNM70401.1__X__00057

Identity

Accession:
OR576728 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-98
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 47.0 5.95e-01 70.8% 100.0%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.78 63.0 6.72e-01 85.4% 98.8%
4uhvA04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.77 60.0 5.91e-01 82.3% 90.3%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 56.0 6.31e-01 82.3% 100.0%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 51.0 5.59e-01 71.9% 83.5%
3zjyC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 48.0 5.41e-01 74.0% 86.5%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 45.0 5.43e-01 72.9% 100.0%
1uwvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 47.0 5.30e-01 80.2% 91.8%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 49.0 5.28e-01 75.0% 87.5%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 48.0 4.71e-01 77.1% 67.6%
2id0A02 2.40.50.640 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 48.0 5.40e-01 76.0% 97.3%
1d7qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 50.0 4.39e-01 78.1% 66.4%
3ntkB01 2.40.50.790 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 49.0 5.12e-01 80.2% 98.8%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 47.0 4.24e-01 79.2% 73.3%
3bdlA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 51.0 4.34e-01 86.5% 72.7%
4qmgA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 51.0 4.43e-01 86.5% 70.1%
1luzA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 46.0 4.86e-01 79.2% 94.1%
5ygbA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 47.0 4.26e-01 81.2% 97.7%
5j39A01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 4.40e-01 83.3% 93.7%
6we5A00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.61 44.0 3.41e-01 74.0% 58.3%
4g1lA01 2.70.20.50 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain 0.57 39.0 3.35e-01 70.8% 48.5%
2khjA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 4.29e-01 78.1% 85.4%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957569 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.82 61.0 6.19e-01 77.1% 86.3%
5058911 2.7.1.0 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N 0.81 69.0 6.60e-01 90.6% 100.0%
5083382 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.80 49.0 6.09e-01 70.8% 100.0%
4981339 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.80 50.0 4.68e-01 74.0% 53.0%
3511510 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 49.0 4.55e-01 74.0% 50.8%
3374891 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 49.0 4.62e-01 74.0% 53.0%
4011957 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 49.0 4.62e-01 74.0% 53.0%
4988106 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 64.0 6.33e-01 86.5% 100.0%
4946866 2.1.1.216 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AAA 0.78 49.0 4.95e-01 74.0% 64.2%
4950506 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 47.0 4.61e-01 74.0% 56.2%
4957484 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 48.0 4.79e-01 74.0% 61.0%
3165931 2.7.1.3 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_Mu_Gp45 0.77 63.0 6.63e-01 87.5% 97.6%
1755798 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.77 49.0 5.84e-01 78.1% 98.4%
3946740 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.76 65.0 6.70e-01 90.6% 97.8%
1731165 2.7.1.1 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V 0.75 64.0 6.66e-01 90.6% 97.8%
3970340 2.7.1.4 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › DUF6484 0.75 50.0 4.49e-01 71.9% 50.4%
4889459 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 47.0 4.76e-01 75.0% 67.0%
3687458 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.72 52.0 5.84e-01 75.0% 96.0%
4067858 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 51.0 5.86e-01 74.0% 100.0%
3383283 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 48.0 5.58e-01 76.0% 100.0%
4369338 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.71 48.0 5.55e-01 77.1% 95.7%
5026951 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 51.0 4.61e-01 74.0% 93.6%
4252610 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 51.0 5.33e-01 75.0% 100.0%
3606199 2.1.1.107 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.71 53.0 5.01e-01 79.2% 97.4%
1832945 2.1.1.78 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PCB_OB 0.70 48.0 4.71e-01 70.8% 68.6%
3854815 2.1.1.177 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.70 52.0 5.30e-01 80.2% 78.9%
3752702 2.1.1.107 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.70 52.0 5.09e-01 78.1% 82.7%
4986053 2.1.1.21 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 0.70 46.0 5.09e-01 79.2% 85.3%
4161370 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.69 43.0 5.19e-01 72.9% 100.0%
5068990 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 46.0 5.30e-01 79.2% 95.7%
3386881 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.68 49.0 5.05e-01 75.0% 78.9%
4943419 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 42.0 5.14e-01 76.0% 100.0%
3616997 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 50.0 4.94e-01 76.0% 84.0%
4512935 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.68 50.0 4.50e-01 76.0% 96.1%
3977606 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 49.0 4.88e-01 75.0% 76.0%
4582532 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 49.0 5.32e-01 75.0% 91.3%
5062547 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.68 43.0 3.03e-01 76.0% 21.0%
3601876 2.1.1.107 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.68 50.0 5.13e-01 78.1% 95.7%
3620906 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 50.0 5.53e-01 79.2% 100.0%
3479656 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 54.0 4.86e-01 85.4% 71.5%
5042671 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.67 49.0 4.47e-01 75.0% 91.1%
4630654 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 50.0 5.54e-01 78.1% 98.7%
3244964 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 49.0 5.08e-01 77.1% 84.4%
1736885 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.67 48.0 5.35e-01 78.1% 98.6%
3472943 2.1.1.107 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.67 53.0 5.12e-01 85.4% 84.5%
4649435 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.31e-01 83.3% 100.0%
4939170 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 40.0 4.28e-01 72.9% 68.2%
3880677 2.1.1.251 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_HELZ2 0.66 46.0 4.86e-01 77.1% 81.2%
4982395 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 42.0 3.08e-01 76.0% 24.3%
4287649 2.1.1.104 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_1st 0.66 45.0 5.12e-01 71.9% 95.7%
4060909 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.66 48.0 4.21e-01 75.0% 84.8%
4339468 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 48.0 5.01e-01 77.1% 82.2%
4162174 2.1.1.100 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 0.66 48.0 5.37e-01 78.1% 100.0%
4518886 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.66 48.0 4.78e-01 76.0% 75.0%
4987060 2.1.1.109 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 0.66 49.0 5.11e-01 79.2% 96.7%
3498011 2.1.1.116 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.65 50.0 4.84e-01 80.2% 74.3%
3587562 2.1.1.104 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_1st 0.65 45.0 5.12e-01 72.9% 98.6%
3578391 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 49.0 4.93e-01 79.2% 83.2%
4965423 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 46.0 4.25e-01 75.0% 92.8%
3925804 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.64 51.0 4.31e-01 85.4% 76.2%
3261189 2.6.1.1 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.64 51.0 4.27e-01 85.4% 60.0%
3988534 2.1.1.104 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_1st 0.64 46.0 5.12e-01 76.0% 96.0%
4404109 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 45.0 5.07e-01 79.2% 100.0%
3995180 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.63 51.0 3.98e-01 86.5% 76.1%
4562052 2.1.1.100 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 0.63 44.0 5.01e-01 75.0% 100.0%
4230617 2.1.1.100 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 0.63 45.0 5.01e-01 76.0% 100.0%
3930533 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.63 44.0 4.93e-01 74.0% 100.0%
3485853 2.6.1.1 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.63 50.0 4.08e-01 86.5% 61.7%
4459066 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.62 48.0 4.28e-01 83.3% 70.0%
4172592 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.62 46.0 4.93e-01 83.3% 93.8%
3407819 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 4.74e-01 83.3% 91.0%
3668360 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.61 42.0 3.74e-01 70.8% 86.7%
3580169 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.61 53.0 4.29e-01 100.0% 71.5%
4589357 2.6.1.1 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.61 47.0 3.98e-01 82.3% 62.5%
4075688 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.60 46.0 3.46e-01 83.3% 40.8%
4320148 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.59 48.0 3.37e-01 89.6% 49.5%
3922015 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.57 33.0 3.01e-01 97.9% 40.0%
3518837 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.56 49.0 4.51e-01 97.9% 100.0%
D2 medium residues 103-162
PDB