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OR608736.1__WRQ07066.1__ZBUARNPM_CDS0317__00316

Bact-Vir

OR608736.1__WRQ07066.1__ZBUARNPM_CDS0317__00316

Identity

Accession:
OR608736 ↗
Kingdom:
phage

Quality

71.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phikzvirus› Pseudomonas_phage_14Ps5-6

TaxID: 3090677

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-32
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ne2B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 55.0 3.53e-01 100.0% 19.1%
3u6yA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.66 49.0 3.70e-01 100.0% 31.3%
5eqjB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 50.0 3.04e-01 93.8% 37.6%
2x8xX03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.63 45.0 3.56e-01 96.9% 32.5%
5xyiU00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 46.0 3.60e-01 100.0% 51.5%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 46.0 3.50e-01 100.0% 43.6%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.62 42.0 2.88e-01 100.0% 16.7%
6tmfM00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.61 43.0 3.41e-01 100.0% 52.0%
2xzmJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.60 45.0 3.44e-01 100.0% 53.3%
1zxqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 3.45e-01 87.5% 30.6%
3es1A01 2.20.70.150 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.59 43.0 4.31e-01 96.9% 91.9%
2ej4A01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 40.0 3.23e-01 84.4% 31.8%
4q52A00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.58 41.0 2.79e-01 93.8% 46.9%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.57 43.0 2.88e-01 93.8% 38.3%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 41.0 2.42e-01 100.0% 31.0%
2kqfA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 39.0 3.10e-01 90.6% 31.2%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.95e-01 90.6% 64.1%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 2.88e-01 100.0% 38.4%
7xlqD01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 39.0 2.80e-01 78.1% 19.4%
3anoA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.55 44.0 2.90e-01 100.0% 20.9%
4l8kD02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.54 37.0 2.43e-01 93.8% 16.7%
3l7xA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.54 43.0 2.85e-01 100.0% 20.4%
3ksrA01 6.20.370.100 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.53 36.0 3.70e-01 75.0% 100.0%
6qj2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 2.23e-01 96.9% 7.9%
1emsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.52 42.0 2.92e-01 100.0% 24.6%
6iq1A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.51 39.0 2.66e-01 93.8% 26.6%
5ccbA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 35.0 2.35e-01 100.0% 40.5%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3471065 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.79 63.0 3.50e-01 100.0% 7.1%
3303787 109.4.1.1266 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, ARM_PUB 0.76 58.0 3.33e-01 96.9% 8.4%
3504365 633.23.1.38 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › TMEM127 0.74 56.0 3.39e-01 100.0% 12.9%
3919375 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.70 51.0 3.89e-01 100.0% 31.0%
3648114 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.68 53.0 4.14e-01 100.0% 37.6%
3264820 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 52.0 2.95e-01 100.0% 14.3%
3264140 3082.1.1.0 ↗ extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 0.66 48.0 4.83e-01 100.0% 85.7%
3940319 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 54.0 3.10e-01 100.0% 8.7%
5058661 304.55.1.14 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp 0.65 47.0 3.34e-01 90.6% 26.9%
3169722 109.4.1.298 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel 0.65 51.0 3.02e-01 93.8% 42.4%
3582577 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 44.0 3.06e-01 81.2% 21.5%
4220865 4186.1.1.1 ↗ beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.61 45.0 3.33e-01 100.0% 28.7%
3272198 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.61 47.0 2.88e-01 100.0% 24.7%
3593809 304.31.1.0 ↗ a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase 0.61 45.0 3.40e-01 100.0% 35.5%
3743821 102.2.1.0 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH 0.61 47.0 3.19e-01 96.9% 57.2%
3241140 2004.1.1.199 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.60 48.0 2.67e-01 100.0% 4.8%
3622764 4154.1.1.2 ↗ beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F_CC-MB 0.60 46.0 3.36e-01 90.6% 27.6%
4089814 327.13.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C 0.59 46.0 3.08e-01 96.9% 33.5%
3585219 387.1.3.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like 0.59 44.0 4.18e-01 96.9% 62.8%
3519176 4154.1.1.2 ↗ beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F_CC-MB 0.59 44.0 3.25e-01 90.6% 27.6%
3328712 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.58 43.0 2.73e-01 100.0% 13.5%
3995914 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.57 40.0 2.56e-01 96.9% 20.8%
3591285 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 43.0 2.55e-01 100.0% 10.8%
3923193 3382.1.1.1 ↗ alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.56 40.0 2.41e-01 100.0% 34.2%
4437448 7026.1.1.5 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD 0.56 43.0 2.68e-01 96.9% 12.5%
3932407 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 38.0 2.38e-01 71.9% 19.1%
5039071 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.56 41.0 3.10e-01 90.6% 23.5%
3705393 3636.1.1.1 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain › HBB 0.54 41.0 3.12e-01 93.8% 41.1%
3390656 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 39.0 2.10e-01 78.1% 2.2%
3495008 3382.1.1.1 ↗ alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.52 37.0 2.20e-01 81.2% 7.1%
3709245 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.13e-01 100.0% 72.9%
3418209 2004.1.1.168 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB 0.51 36.0 2.49e-01 93.8% 18.3%
3582680 2007.1.4.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat 0.51 33.0 2.68e-01 100.0% 27.5%
3741228 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 37.0 2.10e-01 87.5% 10.5%
4176213 11.1.1.182 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.50 37.0 2.55e-01 100.0% 24.7%