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OR613466.1__WNT44237.1__SEA_CANDC_24__00024
Bact-VirOR613466.1__WNT44237.1__SEA_CANDC_24__00024
Identity
- Accession:
- OR613466 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Taxonomy
TaxID: 3078572
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-34_70-121_207-229
Domain cluster:
representative
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 45.0 | 4.48e-01 | 87.4% | 61.1% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.71 | 44.0 | 4.19e-01 | 80.5% | 54.0% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 39.0 | 3.82e-01 | 81.6% | 51.0% |
| 6a2bB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 42.0 | 4.17e-01 | 80.5% | 57.4% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 42.0 | 4.05e-01 | 88.5% | 54.5% |
| 4of8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 42.0 | 4.02e-01 | 81.6% | 54.4% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.67 | 48.0 | 4.11e-01 | 97.7% | 47.1% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.66 | 39.0 | 3.14e-01 | 77.0% | 30.7% |
| 2wngA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 40.0 | 3.78e-01 | 81.6% | 51.4% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.64 | 36.0 | 3.93e-01 | 77.0% | 65.8% |
| 3u3lC00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.64 | 58.0 | 4.24e-01 | 100.0% | 58.7% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 3.72e-01 | 79.3% | 47.5% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 40.0 | 3.88e-01 | 88.5% | 57.9% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 38.0 | 3.95e-01 | 75.9% | 61.9% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.62 | 38.0 | 3.96e-01 | 98.9% | 66.7% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 42.0 | 3.85e-01 | 82.8% | 54.5% |
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.61 | 36.0 | 3.76e-01 | 79.3% | 61.0% |
| 1g84A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 37.0 | 3.52e-01 | 79.3% | 50.5% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 38.0 | 3.84e-01 | 89.7% | 62.5% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 3.81e-01 | 82.8% | 55.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 36.0 | 3.62e-01 | 77.0% | 57.8% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 35.0 | 3.62e-01 | 79.3% | 63.3% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.58 | 41.0 | 3.88e-01 | 75.9% | 63.6% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 3.64e-01 | 75.9% | 59.2% |
| 3qw9B00 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.57 | 48.0 | 3.83e-01 | 89.7% | 54.8% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 40.0 | 3.69e-01 | 92.0% | 55.2% |
| 2py6A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 33.0 | 2.64e-01 | 72.4% | 27.2% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 35.0 | 3.63e-01 | 89.7% | 66.7% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 34.0 | 2.82e-01 | 77.0% | 31.3% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.56 | 42.0 | 3.69e-01 | 82.8% | 58.7% |
| 6iomB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 36.0 | 3.80e-01 | 81.6% | 72.7% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.56 | 44.0 | 4.04e-01 | 85.1% | 86.8% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 35.0 | 3.41e-01 | 77.0% | 56.8% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 35.0 | 3.41e-01 | 88.5% | 56.8% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 32.0 | 3.25e-01 | 79.3% | 53.9% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 42.0 | 3.75e-01 | 82.8% | 96.9% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 33.0 | 3.44e-01 | 74.7% | 64.1% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 41.0 | 3.20e-01 | 79.3% | 98.5% |
| 2cpmA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.55 | 31.0 | 3.09e-01 | 77.0% | 51.1% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 34.0 | 3.01e-01 | 96.6% | 42.1% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.54 | 37.0 | 3.46e-01 | 78.2% | 53.6% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 34.0 | 3.50e-01 | 78.2% | 66.3% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.54 | 35.0 | 2.82e-01 | 86.2% | 33.7% |
| 2gvhC01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 40.0 | 3.53e-01 | 81.6% | 55.9% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.53 | 30.0 | 2.81e-01 | 80.5% | 42.3% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.52 | 38.0 | 3.47e-01 | 77.0% | 90.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 3.33e-01 | 80.5% | 68.1% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.28e-01 | 78.2% | 59.1% |
| 2lu1A00 | 3.30.70.2370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 35.0 | 3.56e-01 | 87.4% | 69.7% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 33.0 | 3.53e-01 | 75.9% | 75.7% |
| 3ocjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 2.59e-01 | 77.0% | 29.3% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.52 | 34.0 | 3.47e-01 | 86.2% | 69.5% |
| 3lurA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.52 | 45.0 | 3.69e-01 | 96.6% | 58.9% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 38.0 | 3.24e-01 | 77.0% | 76.1% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 29.0 | 3.22e-01 | 72.4% | 68.7% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 33.0 | 3.51e-01 | 78.2% | 74.7% |
| 4qmfD02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 32.0 | 3.15e-01 | 82.8% | 58.7% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.52e-01 | 82.8% | 63.6% |
| 2fphX01 | 3.30.1370.160 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 30.0 | 3.13e-01 | 75.9% | 63.6% |
| 7ec0P01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 41.0 | 3.20e-01 | 90.8% | 94.9% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4416704 | 11.1.1.587 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR1-3_N_Ig-like | 0.74 | 45.0 | 4.38e-01 | 79.3% | 56.8% |
| 3586352 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.68 | 62.0 | 5.84e-01 | 100.0% | 87.6% |
| 3613200 | 304.134.1.0 ↗ | a+b two layers › Alpha-beta plaits › MJ1480-like › MJ1480-like | 0.66 | 42.0 | 4.17e-01 | 75.9% | 62.2% |
| 3580419 | 3914.1.1.2 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer | 0.65 | 44.0 | 2.55e-01 | 70.1% | 37.8% |
| 4982458 | 304.162.1.2 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M | 0.64 | 38.0 | 4.26e-01 | 77.0% | 74.3% |
| 3482574 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.64 | 57.0 | 5.25e-01 | 100.0% | 80.7% |
| 3391269 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.64 | 49.0 | 4.43e-01 | 81.6% | 60.9% |
| 3498135 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.64 | 58.0 | 5.41e-01 | 98.9% | 86.7% |
| 3477897 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.63 | 40.0 | 4.02e-01 | 80.5% | 62.2% |
| 4514876 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.63 | 43.0 | 4.72e-01 | 87.4% | 87.1% |
| 3724442 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.63 | 39.0 | 4.35e-01 | 77.0% | 78.6% |
| 3236767 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.63 | 51.0 | 4.95e-01 | 88.5% | 80.0% |
| 5075416 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.63 | 38.0 | 3.49e-01 | 77.0% | 47.3% |
| 3965732 | 304.13.1.1 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB | 0.62 | 38.0 | 3.66e-01 | 80.5% | 53.0% |
| 3690420 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.62 | 50.0 | 4.98e-01 | 88.5% | 83.3% |
| 4674141 | 273.1.1.5 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF29714 | 0.62 | 55.0 | 5.02e-01 | 100.0% | 79.7% |
| 3210445 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.61 | 50.0 | 4.82e-01 | 88.5% | 79.8% |
| 4668047 | 273.1.1.5 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF29714 | 0.61 | 54.0 | 4.90e-01 | 100.0% | 83.3% |
| 4971295 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.61 | 36.0 | 3.49e-01 | 78.2% | 52.6% |
| 3672141 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.60 | 36.0 | 3.93e-01 | 75.9% | 72.9% |
| 3247697 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.60 | 51.0 | 5.07e-01 | 98.9% | 92.2% |
| 3581051 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.59 | 52.0 | 5.15e-01 | 100.0% | 94.4% |
| 3789491 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.59 | 38.0 | 3.84e-01 | 75.9% | 67.1% |
| 3320298 | 4955.1.1.8 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › AtuA_ferredoxin | 0.59 | 42.0 | 3.76e-01 | 75.9% | 64.5% |
| 4540833 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 39.0 | 3.98e-01 | 88.5% | 70.6% |
| 3793391 | 304.28.1.30 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SCVP | 0.57 | 38.0 | 3.57e-01 | 79.3% | 53.6% |
| 5073065 | 812.1.1.0 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain | 0.57 | 40.0 | 4.52e-01 | 75.9% | 98.5% |
| 4182510 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.57 | 42.0 | 4.17e-01 | 79.3% | 74.4% |
| 1505699 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.57 | 41.0 | 4.12e-01 | 79.3% | 74.7% |
| 3700806 | 304.31.1.3 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › FAZ1_cons | 0.57 | 41.0 | 4.01e-01 | 79.3% | 69.5% |
| 3704046 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.57 | 40.0 | 3.92e-01 | 82.8% | 67.4% |
| 4990439 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.57 | 40.0 | 3.87e-01 | 79.3% | 64.0% |
| 3705407 | 304.47.1.2 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › FAZ1_cons | 0.57 | 40.0 | 3.91e-01 | 81.6% | 67.4% |
| 3716251 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.57 | 40.0 | 3.94e-01 | 83.9% | 68.4% |
| 3382026 | 304.55.1.20 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P | 0.57 | 44.0 | 3.66e-01 | 95.4% | 48.3% |
| 3718671 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.57 | 40.0 | 2.91e-01 | 81.6% | 25.1% |
| 3318771 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 39.0 | 3.87e-01 | 85.1% | 68.9% |
| 3715810 | 304.47.1.2 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › FAZ1_cons | 0.56 | 44.0 | 4.21e-01 | 95.4% | 71.4% |
| 3608237 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.56 | 38.0 | 3.75e-01 | 82.8% | 65.3% |
| 5082343 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 40.0 | 2.97e-01 | 74.7% | 73.9% |
| 4935067 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.56 | 34.0 | 3.44e-01 | 78.2% | 60.0% |
| 3172537 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.55 | 45.0 | 3.68e-01 | 90.8% | 98.2% |
| 3570820 | 304.112.1.10 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › Med13_N | 0.55 | 38.0 | 2.89e-01 | 90.8% | 29.4% |
| 4318194 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.55 | 42.0 | 3.90e-01 | 85.1% | 85.2% |
| 4628544 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 42.0 | 3.87e-01 | 85.1% | 85.2% |
| 4114828 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.54 | 42.0 | 3.97e-01 | 86.2% | 90.0% |
| 4971846 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.54 | 40.0 | 2.73e-01 | 81.6% | 55.1% |
| 4220147 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 32.0 | 3.31e-01 | 78.2% | 60.0% |
| 4934117 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 33.0 | 3.36e-01 | 78.2% | 62.4% |
| 3493139 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.53 | 44.0 | 3.98e-01 | 92.0% | 91.2% |
| 3940836 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.53 | 37.0 | 3.54e-01 | 78.2% | 61.0% |
| 3609340 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.53 | 32.0 | 3.16e-01 | 75.9% | 53.7% |
| 3602581 | 881.3.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Outer membrane-associated lipoprotein TP0453 › Outer membrane-associated lipoprotein TP0453 | 0.53 | 36.0 | 2.56e-01 | 78.2% | 24.4% |
| 5620 | 320.3.1.1 ↗ | a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 | 0.53 | 30.0 | 2.81e-01 | 80.5% | 42.3% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.52 | 38.0 | 3.49e-01 | 77.0% | 92.2% |
| 184823 | 304.7.1.9 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Pro_sub2 | 0.52 | 35.0 | 3.56e-01 | 87.4% | 69.7% |
| 3475397 | 309.1.1.11 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 | 0.52 | 36.0 | 3.06e-01 | 82.8% | 42.0% |
| 4006695 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.52 | 37.0 | 2.98e-01 | 77.0% | 86.3% |
| 3200539 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.51 | 42.0 | 3.53e-01 | 88.5% | 60.7% |
| 3934872 | 3122.1.1.2 ↗ | a+b complex topology › MESD › MESD › MESD › SCVP | 0.51 | 39.0 | 3.70e-01 | 88.5% | 68.6% |
| 3737983 | 309.1.1.13 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16,Peptidase_M16_C,M16C_assoc | 0.51 | 45.0 | 2.62e-01 | 100.0% | 81.9% |
| 3668273 | 246.3.1.2 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › RNase_E_G | 0.50 | 37.0 | 3.14e-01 | 79.3% | 66.7% |
| 4854408 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.50 | 37.0 | 3.37e-01 | 88.5% | 57.5% |
D2
medium
residues 122-206_230-245
Domain cluster:
rep: KR011061.1__AKJ71677.1__SPI1_16__00016__D50-146_175-190
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.71 | 66.0 | 6.59e-01 | 100.0% | 100.0% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.70 | 64.0 | 5.99e-01 | 100.0% | 99.2% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.68 | 58.0 | 6.00e-01 | 97.0% | 97.9% |
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.66 | 55.0 | 5.70e-01 | 93.1% | 96.8% |
| 2dm9A00 | 3.30.2320.30 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal | 0.62 | 47.0 | 4.50e-01 | 93.1% | 68.6% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.62 | 42.0 | 4.31e-01 | 74.3% | 72.9% |
| 2ohwA00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.56 | 46.0 | 4.32e-01 | 100.0% | 71.9% |
| 1nyrA03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 49.0 | 3.52e-01 | 100.0% | 44.3% |
| 2ox7A01 | 2.30.30.310 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.55 | 31.0 | 3.71e-01 | 83.2% | 87.1% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.51e-01 | 100.0% | 87.7% |
| 1f0lA03 | 2.60.40.700 | Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain | 0.54 | 47.0 | 4.13e-01 | 99.0% | 94.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083777 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.79 | 73.0 | 5.10e-01 | 100.0% | 47.7% |
| 4995674 | 2485.3.1.5 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 | 0.78 | 72.0 | 5.26e-01 | 100.0% | 64.3% |
| 5083079 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.75 | 68.0 | 4.71e-01 | 99.0% | 45.5% |
| 4125320 | 298.4.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › FliH | 0.75 | 51.0 | 5.53e-01 | 91.1% | 83.5% |
| 4955362 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.74 | 66.0 | 4.97e-01 | 97.0% | 56.8% |
| 2841997 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.73 | 65.0 | 4.41e-01 | 99.0% | 58.4% |
| 3603036 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.72 | 65.0 | 4.83e-01 | 99.0% | 53.3% |
| 4282818 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.72 | 55.0 | 5.01e-01 | 92.1% | 61.5% |
| 4201753 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.71 | 53.0 | 4.84e-01 | 93.1% | 60.0% |
| 5011908 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.71 | 64.0 | 4.84e-01 | 99.0% | 53.3% |
| 3587769 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.67 | 61.0 | 4.37e-01 | 100.0% | 50.0% |
| 4937661 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.65 | 45.0 | 4.56e-01 | 95.0% | 72.0% |
| 4526172 | 3464.1.1.1 ↗ | extended segments › Helical region in V-type proton ATPase subunit E › Helical region in V-type proton ATPase subunit E › Helical region in V-type proton ATPase subunit E › vATP-synt_E | 0.55 | 41.0 | 3.40e-01 | 95.0% | 43.8% |
| 3734573 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.53 | 44.0 | 3.08e-01 | 93.1% | 60.1% |
| 3839545 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.52 | 44.0 | 3.02e-01 | 97.0% | 58.2% |
| 5069502 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 3.83e-01 | 75.2% | 91.6% |
| 4986992 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.50 | 41.0 | 2.62e-01 | 89.1% | 63.5% |