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OR613467.1__WNT44354.1__SEA_MABODAMACA_36__00036

Bact-Vir

OR613467.1__WNT44354.1__SEA_MABODAMACA_36__00036

Identity

Accession:
OR613467 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casidaviridae› Mabodamacavirus› Microbacterium_phage_Mabodamaca

TaxID: 3078574

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.37e-01 93.5% 85.7%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 5.21e-01 85.5% 100.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.65 57.0 4.85e-01 100.0% 69.6%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 55.0 4.08e-01 100.0% 98.3%
2hcjB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 55.0 4.84e-01 100.0% 93.6%
1ub4A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 4.56e-01 96.8% 80.6%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.11e-01 96.8% 91.9%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.90e-01 91.9% 87.3%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.61 50.0 4.13e-01 100.0% 48.7%
1g7sA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 53.0 4.49e-01 100.0% 87.0%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 5.28e-01 91.9% 100.0%
2jveA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.61 43.0 4.16e-01 85.5% 66.2%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.60 52.0 4.00e-01 95.2% 89.0%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.60 51.0 5.10e-01 96.8% 100.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.91e-01 96.8% 98.6%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 49.0 4.83e-01 95.2% 100.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.60 48.0 4.00e-01 88.7% 58.7%
2wyrB02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.59 50.0 4.55e-01 96.8% 100.0%
2zl7A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 51.0 4.52e-01 100.0% 96.7%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.74e-01 90.3% 100.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 4.43e-01 85.5% 100.0%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.30e-01 79.0% 100.0%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.58 48.0 3.88e-01 96.8% 82.0%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.11e-01 93.5% 60.0%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.82e-01 83.9% 83.2%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.57 48.0 4.43e-01 96.8% 100.0%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 45.0 3.51e-01 90.3% 91.2%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.57 47.0 3.88e-01 100.0% 48.4%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 46.0 4.11e-01 93.5% 75.5%
2zbvC02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.56 47.0 4.05e-01 95.2% 93.1%
2xrcC04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.09e-01 82.3% 46.1%
2yvlA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 46.0 4.72e-01 100.0% 100.0%
5aq0B00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.56 39.0 3.63e-01 75.8% 61.0%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.26e-01 87.1% 77.5%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 45.0 4.06e-01 93.5% 65.6%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 42.0 3.40e-01 85.5% 41.9%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.58e-01 90.3% 99.2%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 46.0 3.98e-01 96.8% 69.9%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.29e-01 93.5% 95.9%
5ylyA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 45.0 3.89e-01 100.0% 95.5%
4kx7A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 4.27e-01 98.4% 91.7%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.54 44.0 3.95e-01 91.9% 65.9%
3dohA01 2.60.40.2180 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.59e-01 96.8% 82.2%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.54 46.0 4.26e-01 100.0% 98.8%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.54 37.0 3.98e-01 82.3% 90.0%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.54 43.0 3.79e-01 90.3% 63.5%
2d44A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 2.68e-01 88.7% 17.2%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.57e-01 100.0% 55.5%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.71e-01 96.8% 72.1%
1ti2A04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.52 43.0 3.31e-01 95.2% 88.4%
2nq3A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 38.0 3.20e-01 85.5% 88.5%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.96e-01 93.5% 68.2%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.52 42.0 3.26e-01 100.0% 57.6%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 2.99e-01 90.3% 33.9%
7a1rA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 38.0 3.19e-01 83.9% 69.5%
3kuzB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 43.0 3.67e-01 100.0% 91.7%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.50 40.0 3.31e-01 100.0% 47.9%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.73 65.0 5.85e-01 100.0% 89.4%
3308604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 59.0 5.51e-01 93.5% 82.7%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 59.0 5.32e-01 95.2% 88.2%
4287411 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.69 61.0 5.62e-01 98.4% 86.3%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 55.0 5.76e-01 87.1% 96.4%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.69 59.0 5.69e-01 95.2% 90.0%
5017161 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.68 59.0 5.37e-01 100.0% 88.2%
4979291 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 59.0 5.50e-01 95.2% 85.3%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 58.0 5.49e-01 95.2% 84.0%
5036592 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 58.0 5.46e-01 95.2% 86.7%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 58.0 5.62e-01 95.2% 88.6%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.68 53.0 5.64e-01 87.1% 96.4%
3499855 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.34e-01 95.2% 98.7%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.79e-01 93.5% 100.0%
3601162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.37e-01 88.7% 89.2%
5037939 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 59.0 4.41e-01 100.0% 41.9%
5079674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.66 58.0 5.48e-01 98.4% 96.0%
5057445 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.66 55.0 4.93e-01 100.0% 67.1%
139950 4.1.1.126 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5608 0.66 53.0 5.53e-01 95.2% 100.0%
4948433 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 55.0 5.42e-01 95.2% 92.6%
5055505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 56.0 5.11e-01 98.4% 97.6%
4937389 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 57.0 4.75e-01 100.0% 58.2%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 54.0 5.40e-01 95.2% 93.8%
4422251 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.64 48.0 5.23e-01 87.1% 100.0%
5081442 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 54.0 5.24e-01 95.2% 90.0%
5066224 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.64 56.0 4.99e-01 100.0% 71.1%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.64 49.0 5.13e-01 96.8% 94.5%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 54.0 5.37e-01 95.2% 90.8%
4321173 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.63 51.0 5.24e-01 100.0% 98.3%
3433070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.01e-01 98.4% 82.6%
3356591 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.74e-01 100.0% 77.9%
4957377 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.62 48.0 4.80e-01 88.7% 82.5%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.83e-01 82.3% 96.0%
4125814 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 54.0 5.10e-01 100.0% 94.7%
3502086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.58e-01 96.8% 85.5%
3267329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.18e-01 98.4% 48.0%
4391995 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.61 52.0 4.81e-01 100.0% 96.5%
4438946 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.61 52.0 4.74e-01 98.4% 96.5%
4966519 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.61 48.0 4.92e-01 87.1% 100.0%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.97e-01 93.5% 93.3%
3733806 4.1.1.72 ↗ beta barrels › SH3 › SH3 › SH3 › Hva1_TUDOR 0.60 52.0 4.93e-01 98.4% 100.0%
5036377 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 50.0 4.05e-01 96.8% 90.4%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.09e-01 95.2% 80.0%
4553723 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 50.0 4.47e-01 100.0% 88.4%
3449268 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.61e-01 100.0% 98.8%
3886139 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 48.0 4.82e-01 95.2% 96.9%
3259547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.16e-01 100.0% 82.6%
3349135 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.44e-01 98.4% 90.0%
4163756 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.58 48.0 4.33e-01 100.0% 89.5%
3318145 109.4.1.1521 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif 0.57 43.0 2.86e-01 82.3% 35.4%
3354291 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.57 43.0 2.77e-01 82.3% 29.8%
3659149 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 49.0 4.15e-01 98.4% 100.0%
4018860 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 46.0 3.82e-01 100.0% 96.8%
3289921 11.1.1.424 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2771 0.55 47.0 3.72e-01 98.4% 76.3%
1871771 1.1.5.43 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MrkH_YcgR_like 0.55 47.0 3.99e-01 100.0% 57.7%
3219469 4004.1.1.0 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like 0.52 39.0 2.72e-01 82.3% 95.3%
3679857 109.4.1.2337 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 0.51 43.0 2.71e-01 98.4% 75.7%
5037974 4004.1.1.1 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C 0.51 43.0 3.21e-01 98.4% 76.7%
3817317 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.51 43.0 2.42e-01 98.4% 32.0%
3373205 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.51 42.0 2.47e-01 98.4% 44.1%
3862710 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.48e-01 100.0% 57.7%
3444049 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.51 42.0 2.51e-01 98.4% 51.9%
3826384 109.4.1.1285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif 0.50 43.0 2.64e-01 98.4% 68.5%
3346510 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.50 42.0 2.45e-01 98.4% 47.1%
3427946 109.4.1.1521 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif 0.50 42.0 2.49e-01 100.0% 54.2%
3419226 109.4.1.3173 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.50 42.0 2.66e-01 98.4% 81.4%
3374942 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.50 42.0 2.48e-01 98.4% 54.6%
D2 high residues 75-121
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.68 52.0 3.06e-01 85.1% 90.4%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.67 49.0 4.67e-01 80.9% 70.2%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 56.0 3.47e-01 100.0% 16.6%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 3.20e-01 95.7% 16.7%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.63 53.0 4.73e-01 100.0% 71.2%
3nksA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 46.0 2.66e-01 78.7% 54.8%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 3.61e-01 100.0% 51.9%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 53.0 3.29e-01 100.0% 17.3%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 52.0 3.60e-01 100.0% 51.4%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.61 44.0 3.51e-01 80.9% 93.5%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 3.11e-01 97.9% 30.4%
3jyyA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.60 43.0 3.07e-01 74.5% 26.1%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 43.0 2.99e-01 80.9% 64.0%
2e2oA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 40.0 2.88e-01 74.5% 98.2%
3kifD00 2.20.25.650 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like 0.59 42.0 3.47e-01 76.6% 82.4%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 43.0 2.69e-01 85.1% 46.1%
2mdiA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.57 42.0 4.04e-01 80.9% 83.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.50e-01 100.0% 91.7%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 39.0 2.58e-01 78.7% 41.2%
4w82A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.55 44.0 3.28e-01 100.0% 79.9%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.55 38.0 3.84e-01 78.7% 90.0%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.54 45.0 3.26e-01 100.0% 58.9%
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 40.0 4.02e-01 87.2% 93.5%
6o15A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 38.0 2.51e-01 80.9% 52.4%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.53 40.0 3.91e-01 83.0% 98.1%
1tl2A00 2.115.10.10 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Tachylectin 2 0.53 39.0 2.68e-01 91.5% 49.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 43.0 4.15e-01 100.0% 85.7%
1knmA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 42.0 3.24e-01 100.0% 97.7%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.51 39.0 2.93e-01 100.0% 67.1%
1vm7B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 38.0 2.42e-01 85.1% 41.1%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.51 39.0 3.73e-01 91.5% 73.2%
4mb7A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.51 38.0 3.03e-01 95.7% 68.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3622600 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.72 51.0 3.78e-01 83.0% 28.8%
3874056 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.71 52.0 4.93e-01 80.9% 67.3%
4391061 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 48.0 3.61e-01 76.6% 28.3%
5079778 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 61.0 3.52e-01 100.0% 13.6%
4165476 2004.1.1.799 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_27, AAA_29 0.70 60.0 3.46e-01 97.9% 12.3%
4984958 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.69 61.0 3.65e-01 100.0% 17.7%
4998236 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.69 59.0 3.43e-01 100.0% 14.1%
4278911 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.69 50.0 4.93e-01 76.6% 72.0%
5034888 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.68 56.0 4.54e-01 100.0% 89.0%
4980165 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 58.0 3.40e-01 100.0% 14.7%
4679015 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.68 49.0 4.14e-01 78.7% 58.7%
3696026 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 49.0 4.55e-01 78.7% 78.3%
5059555 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.67 56.0 3.38e-01 100.0% 16.8%
3586825 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 55.0 3.35e-01 97.9% 39.4%
3396245 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.66 49.0 3.30e-01 80.9% 20.5%
5032886 2004.1.1.293 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.66 55.0 3.07e-01 97.9% 9.1%
3689945 2004.1.1.23 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom 0.66 46.0 2.79e-01 78.7% 10.5%
3624687 64.1.1.9 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 0.66 55.0 5.44e-01 95.7% 94.0%
4938533 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.66 54.0 3.00e-01 95.7% 7.9%
5047148 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.65 54.0 3.31e-01 100.0% 18.2%
1780951 2004.1.1.514 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_29, SbcC_Walker_B 0.65 54.0 3.23e-01 95.7% 16.2%
4950969 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 54.0 3.18e-01 100.0% 13.4%
4960615 5.1.3.277 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7133 0.65 49.0 2.95e-01 80.9% 93.1%
5057328 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 54.0 3.17e-01 97.9% 14.8%
3568187 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.65 45.0 4.98e-01 80.9% 100.0%
3838381 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.64 51.0 3.17e-01 97.9% 18.4%
847 9.1.1.20 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3255 0.63 52.0 3.99e-01 100.0% 73.8%
169882 10.1.1.32 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sial-lect-inser 0.62 52.0 3.53e-01 100.0% 50.3%
4012190 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 42.0 2.60e-01 74.5% 11.1%
4022249 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.61 49.0 2.90e-01 93.6% 13.0%
4998833 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.61 51.0 3.73e-01 100.0% 85.5%
3718923 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.60 51.0 3.12e-01 100.0% 14.4%
3674411 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.59 40.0 3.90e-01 72.3% 65.5%
3278853 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.23e-01 97.9% 80.0%
3222225 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 42.0 3.85e-01 78.7% 60.0%
3554209 6148.1.1.1 ↗ few secondary structure elements › N-terminal domain of EpCAM › N-terminal domain of EpCAM › N-terminal domain of EpCAM › EpCAM_N 0.57 39.0 4.10e-01 78.7% 90.0%
3212890 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 47.0 3.02e-01 100.0% 24.0%
4960280 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.73e-01 100.0% 75.8%
3628460 3308.1.1.0 ↗ beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme 0.53 40.0 3.57e-01 93.6% 86.3%
3208203 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.53 36.0 3.57e-01 76.6% 78.2%
3926624 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.52 41.0 4.12e-01 100.0% 98.0%
1622647 3504.2.1.0 ↗ beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins 0.51 38.0 3.03e-01 95.7% 68.8%