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OR613469.1__WNT44511.1__SEA_BLUECRAB_55__00055
Bact-VirOR613469.1__WNT44511.1__SEA_BLUECRAB_55__00055
Identity
- Accession:
- OR613469 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Taxonomy
TaxID: 3078578
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.76 | 64.0 | 5.78e-01 | 95.9% | 79.4% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.75 | 65.0 | 4.22e-01 | 98.0% | 24.9% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 61.0 | 4.47e-01 | 95.9% | 39.4% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.71 | 61.0 | 3.72e-01 | 100.0% | 37.3% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.70 | 61.0 | 3.94e-01 | 100.0% | 25.0% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 60.0 | 4.64e-01 | 100.0% | 91.2% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.70 | 59.0 | 4.38e-01 | 98.0% | 38.8% |
| 4b3fX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 3.78e-01 | 100.0% | 84.6% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.69 | 54.0 | 4.98e-01 | 85.7% | 67.2% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 58.0 | 5.20e-01 | 98.0% | 69.9% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 60.0 | 5.98e-01 | 100.0% | 98.1% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.69 | 57.0 | 5.81e-01 | 93.9% | 95.7% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.69 | 60.0 | 3.82e-01 | 100.0% | 73.1% |
| 2yfkA02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.68 | 58.0 | 3.94e-01 | 100.0% | 60.7% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.68 | 58.0 | 5.13e-01 | 100.0% | 67.6% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 56.0 | 5.00e-01 | 100.0% | 64.9% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 52.0 | 5.11e-01 | 89.8% | 81.1% |
| 1z72A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.66 | 53.0 | 3.64e-01 | 100.0% | 55.6% |
| 4a4kA01 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.66 | 54.0 | 4.21e-01 | 95.9% | 40.7% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 54.0 | 3.64e-01 | 100.0% | 65.4% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 57.0 | 5.28e-01 | 100.0% | 87.3% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 55.0 | 4.81e-01 | 95.9% | 62.7% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 3.91e-01 | 89.8% | 38.6% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 52.0 | 3.75e-01 | 89.8% | 48.9% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 54.0 | 4.40e-01 | 95.9% | 51.6% |
| 3hh0A02 | 6.10.250.360 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 52.0 | 4.80e-01 | 91.8% | 74.2% |
| 4jvyB00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 49.0 | 3.34e-01 | 87.8% | 22.6% |
| 4yt2A02 | 1.20.120.1300 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain | 0.62 | 51.0 | 4.08e-01 | 98.0% | 44.3% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.58 | 39.0 | 3.11e-01 | 93.9% | 31.5% |
| 2x1lB02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.55 | 37.0 | 3.33e-01 | 79.6% | 46.1% |
| 3iiiA02 | 1.10.3020.20 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › | 0.55 | 39.0 | 3.92e-01 | 87.8% | 76.9% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.53 | 42.0 | 3.73e-01 | 85.7% | 88.4% |
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.52 | 35.0 | 2.77e-01 | 81.6% | 28.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4229778 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.83 | 70.0 | 7.02e-01 | 93.9% | 92.0% |
| 3591933 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.75 | 59.0 | 3.74e-01 | 87.8% | 17.9% |
| 3286060 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.73 | 57.0 | 5.24e-01 | 89.8% | 66.2% |
| 3410365 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.72 | 61.0 | 3.65e-01 | 100.0% | 22.9% |
| 3227967 | 616.1.1.2 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS | 0.71 | 61.0 | 5.75e-01 | 95.9% | 80.0% |
| 3679373 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 58.0 | 5.29e-01 | 95.9% | 69.2% |
| 5081330 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.69 | 58.0 | 4.28e-01 | 95.9% | 36.3% |
| 5065296 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.69 | 54.0 | 5.12e-01 | 93.9% | 73.3% |
| 3399433 | 3826.1.1.39 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WHEP-TRS | 0.68 | 57.0 | 5.20e-01 | 100.0% | 74.3% |
| 3386373 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.68 | 56.0 | 5.28e-01 | 100.0% | 78.5% |
| 3605626 | 192.12.1.0 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM | 0.68 | 59.0 | 4.64e-01 | 98.0% | 52.4% |
| 3253483 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 57.0 | 5.13e-01 | 95.9% | 67.1% |
| 3779372 | 220.1.1.115 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 | 0.68 | 56.0 | 3.92e-01 | 95.9% | 26.7% |
| 4649366 | 304.58.1.0 ↗ | a+b two layers › Alpha-beta plaits › FepE-like › FepE-like | 0.68 | 55.0 | 3.52e-01 | 100.0% | 47.4% |
| 3441516 | 109.3.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 | 0.67 | 57.0 | 3.52e-01 | 98.0% | 16.0% |
| 3734711 | 7581.1.1.3 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt,Ketoacyl-synt_C | 0.67 | 55.0 | 3.03e-01 | 95.9% | 12.2% |
| 1877692 | 6026.1.1.1 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 | 0.66 | 57.0 | 5.80e-01 | 98.0% | 100.0% |
| 3602796 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.66 | 54.0 | 4.41e-01 | 95.9% | 48.0% |
| 4186632 | 4146.1.1.3 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › PKHD_C | 0.66 | 52.0 | 5.34e-01 | 98.0% | 100.0% |
| 3491310 | 3826.1.1.67 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 | 0.64 | 53.0 | 4.72e-01 | 98.0% | 65.3% |
| 3262218 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.63 | 53.0 | 3.82e-01 | 95.9% | 33.1% |
| 2768748 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.62 | 50.0 | 3.20e-01 | 100.0% | 17.5% |