←Back to structures
OR613478.1__WNT45322.1__SEA_BABYDOTZ_69__00069
Bact-VirOR613478.1__WNT45322.1__SEA_BABYDOTZ_69__00069
Identity
- Accession:
- OR613478 ↗
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Taxonomy
TaxID: 2926085
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-91
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z7eA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.83 | 56.0 | 3.48e-01 | 71.0% | 21.1% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 51.0 | 4.29e-01 | 80.6% | 41.8% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 54.0 | 3.77e-01 | 83.9% | 39.2% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 3.61e-01 | 80.6% | 26.7% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.68 | 52.0 | 3.07e-01 | 87.1% | 17.9% |
| 4cgyA04 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.66 | 48.0 | 3.33e-01 | 90.3% | 21.6% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.64 | 56.0 | 3.81e-01 | 100.0% | 94.7% |
| 1cy9A01 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.64 | 48.0 | 3.35e-01 | 90.3% | 22.9% |
| 2b0jA02 | 1.20.120.1300 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain | 0.62 | 47.0 | 3.44e-01 | 87.1% | 30.4% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.61 | 46.0 | 3.83e-01 | 83.9% | 53.4% |
| 3vokA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 48.0 | 3.07e-01 | 93.5% | 20.5% |
| 4i6vA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.58 | 44.0 | 2.58e-01 | 93.5% | 26.8% |
| 4uqvF02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 48.0 | 3.14e-01 | 100.0% | 42.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3635576 | 7528.1.1.3 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III | 0.86 | 69.0 | 4.42e-01 | 100.0% | 19.4% |
| 3430288 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 53.0 | 5.15e-01 | 74.2% | 82.9% |
| 3977110 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.76 | 53.0 | 3.81e-01 | 74.2% | 29.4% |
| 3389858 | 3379.1.1.0 ↗ | extended segments › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 | 0.74 | 52.0 | 4.59e-01 | 74.2% | 62.2% |
| 4012761 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.74 | 54.0 | 3.08e-01 | 77.4% | 10.7% |
| 4009213 | 103.4.1.22 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF30394 | 0.69 | 55.0 | 3.95e-01 | 90.3% | 56.7% |
| 3617913 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.68 | 56.0 | 4.78e-01 | 93.5% | 84.0% |
| 3305633 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.67 | 51.0 | 3.42e-01 | 90.3% | 21.6% |
| 4930784 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.66 | 48.0 | 4.25e-01 | 83.9% | 100.0% |
| 4878071 | 5101.1.1.1 ↗ | alpha arrays › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › Flav_NS3-hel_C | 0.65 | 53.0 | 3.48e-01 | 100.0% | 44.5% |
| 4466579 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.61 | 45.0 | 3.07e-01 | 90.3% | 20.8% |
| 5014507 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.57 | 44.0 | 2.97e-01 | 90.3% | 38.5% |
| 3912949 | 109.4.1.37 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 | 0.55 | 46.0 | 2.58e-01 | 96.8% | 36.2% |