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OR670591.1__WPF64867.1__FBHYGVHD_CDS0020__00020

Bact-Vir

OR670591.1__WPF64867.1__FBHYGVHD_CDS0020__00020

Identity

Accession:
OR670591 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ehrlichviridae› Chennaivirus› Staphylococcus_phage_MVC_VPHSA1

TaxID: 3088876

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-174
PDB
Domain cluster: rep: DQ340064.2__ABC61276.1__X__00022__D272-425
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pk8A00 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.86 54.0 6.52e-01 95.0% 93.6%
2e0zC03 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.81 52.0 6.23e-01 100.0% 94.8%
3bjqA00 3.90.1690.10 Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain 0.80 75.0 5.71e-01 100.0% 54.7%
7mh2A01 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.79 52.0 6.29e-01 100.0% 100.0%
1ohgA02 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.75 53.0 5.99e-01 100.0% 95.2%
1yueA03 3.30.2320.40 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › 0.62 49.0 5.23e-01 100.0% 94.2%
3bqwA02 3.30.1930.10 Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain 0.60 53.0 5.37e-01 100.0% 94.9%
3mydA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.58 30.0 3.05e-01 79.1% 49.3%
2znhA03 6.20.40.10 Special › Other non-globular › Porin MspA ribbon fold › 0.57 22.0 3.26e-01 71.2% 91.5%
2x8xX03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.56 25.0 3.11e-01 93.5% 65.1%
3obyA03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.56 32.0 3.69e-01 97.8% 76.8%
3mixA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.56 29.0 3.17e-01 78.4% 58.3%
2x49A01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.56 28.0 3.33e-01 79.1% 68.8%
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.55 20.0 2.97e-01 77.7% 76.9%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.52 18.0 2.81e-01 94.2% 76.5%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.51 35.0 3.40e-01 71.2% 90.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
11367 2485.3.1.6 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › ENCP4 0.86 54.0 6.52e-01 95.0% 93.6%
3075730 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.82 77.0 5.72e-01 100.0% 52.0%
2988313 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.82 77.0 6.02e-01 100.0% 52.2%
4929755 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.78 72.0 5.71e-01 100.0% 57.8%
2651377 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.77 72.0 5.50e-01 100.0% 48.1%
2538948 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.75 70.0 5.38e-01 100.0% 49.2%
4873245 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.75 65.0 6.77e-01 97.8% 100.0%
4954548 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.75 69.0 5.48e-01 100.0% 53.8%
3977525 2485.3.1.4 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 0.74 69.0 5.09e-01 100.0% 46.8%
3513770 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.73 67.0 5.22e-01 100.0% 56.4%
2639625 2485.3.1.18 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 0.73 67.0 5.28e-01 100.0% 50.0%
2989363 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.69 63.0 4.88e-01 100.0% 52.9%
5002389 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.69 63.0 4.96e-01 100.0% 55.4%
3277785 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.68 57.0 4.62e-01 100.0% 47.7%
3935711 59.1.3.0 ↗ beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains 0.59 24.0 2.95e-01 95.7% 55.6%
4675036 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.59 31.0 3.59e-01 78.4% 70.0%
4426322 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.58 30.0 3.37e-01 78.4% 63.6%
3968393 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.58 30.0 3.36e-01 78.4% 63.6%
4576632 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.57 30.0 3.33e-01 78.4% 63.6%