←Back to structures
OR670591.1__WPF64912.1__FBHYGVHD_CDS0065__00065
Bact-VirOR670591.1__WPF64912.1__FBHYGVHD_CDS0065__00065
Identity
- Accession:
- OR670591 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Ehrlichviridae›
Chennaivirus›
Staphylococcus_phage_MVC_VPHSA1
TaxID: 3088876
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-87
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07733.19 best | DNA_pol3_alpha | 25.4 | 1.40e-05 | 100.0% | 16.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f2bA04 | 3.30.1900.20 | Alpha Beta › 2-Layer Sandwich › glyoxalase-related enzyme like fold › | 0.74 | 63.0 | 5.40e-01 | 100.0% | 61.3% |
| 7oslA02 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.54 | 37.0 | 2.97e-01 | 75.6% | 59.0% |
| 2qjgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 39.0 | 2.54e-01 | 93.3% | 44.1% |
| 1ojxE00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 40.0 | 2.61e-01 | 93.3% | 48.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953906 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 3.70e-01 | 88.9% | 78.8% |
| 3623991 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.56 | 39.0 | 3.53e-01 | 73.3% | 63.1% |
| 4928753 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.34e-01 | 88.9% | 77.9% |
| 4878386 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.53 | 36.0 | 2.56e-01 | 73.3% | 75.3% |
D2
medium
residues 120-231
Domain cluster:
rep: IMGVR_UViG_3300008004_000605-3300008004-Ga0100395_100035234__D605-687_762-782
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17657.7 best | DNA_pol3_finger | 103.5 | 1.10e-29 | 93.8% | 60.2% |