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OR670591.1__WPF64919.1__FBHYGVHD_CDS0072__00072
Bact-VirOR670591.1__WPF64919.1__FBHYGVHD_CDS0072__00072
Identity
- Accession:
- OR670591 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Ehrlichviridae›
Chennaivirus›
Staphylococcus_phage_MVC_VPHSA1
TaxID: 3088876
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-110
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.70 | 45.0 | 4.89e-01 | 81.9% | 78.4% |
| 2xv4S03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 26.0 | 2.77e-01 | 74.3% | 45.7% |
| 3q23A04 | 6.10.140.1370 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 31.0 | 3.32e-01 | 88.6% | 62.6% |
| 7dkaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 41.0 | 3.41e-01 | 84.8% | 95.9% |
| 1nktA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.52 | 44.0 | 3.71e-01 | 92.4% | 97.7% |
| 2l81A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.51 | 38.0 | 3.26e-01 | 80.0% | 89.8% |
| 4lzgA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.50 | 28.0 | 2.98e-01 | 92.4% | 59.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4104255 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 44.0 | 4.46e-01 | 81.0% | 70.5% |
| 3582614 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.58 | 35.0 | 3.22e-01 | 88.6% | 45.0% |
| 3765704 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 39.0 | 2.52e-01 | 77.1% | 21.4% |
| None | — | 0.53 | 39.0 | 3.27e-01 | 80.0% | 61.5% | |
| None | — | 0.51 | 37.0 | 3.11e-01 | 77.1% | 63.7% | |
| 4250108 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.50 | 40.0 | 3.85e-01 | 87.6% | 80.8% |
| 3577230 | 604.1.1.5 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 | 0.50 | 29.0 | 2.99e-01 | 77.1% | 58.1% |