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OR725122.1__WPF70272.1__BCVP_CDS0244__00243
Bact-VirOR725122.1__WPF70272.1__BCVP_CDS0244__00243
Identity
- Accession:
- OR725122 ↗
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Taxonomy
TaxID: 3087168
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-54
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.78 | 41.0 | 3.07e-01 | 100.0% | 22.2% |
| 3ty4B00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.71 | 46.0 | 2.77e-01 | 100.0% | 9.8% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.69 | 59.0 | 4.32e-01 | 100.0% | 49.4% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.69 | 36.0 | 2.63e-01 | 78.8% | 22.4% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.65 | 49.0 | 3.44e-01 | 100.0% | 25.0% |
| 4n4nB00 | 3.90.640.100 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.64 | 50.0 | 4.94e-01 | 100.0% | 82.1% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 57.0 | 4.46e-01 | 100.0% | 84.9% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.63 | 42.0 | 2.59e-01 | 71.2% | 12.5% |
| 4am6A02 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.63 | 52.0 | 3.81e-01 | 98.1% | 33.5% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 55.0 | 4.34e-01 | 98.1% | 85.6% |
| 6et0A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 44.0 | 3.27e-01 | 80.8% | 27.2% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.61 | 49.0 | 3.19e-01 | 94.2% | 75.2% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.61 | 49.0 | 4.08e-01 | 86.5% | 83.0% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 52.0 | 4.19e-01 | 100.0% | 87.4% |
| 4gs5A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.60 | 34.0 | 2.63e-01 | 75.0% | 27.6% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 48.0 | 3.65e-01 | 100.0% | 41.9% |
| 6lydA01 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.58 | 48.0 | 3.19e-01 | 100.0% | 28.3% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 47.0 | 3.68e-01 | 100.0% | 45.1% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.21e-01 | 86.5% | 93.8% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 50.0 | 3.82e-01 | 98.1% | 48.0% |
| 1rh5A00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.57 | 46.0 | 2.83e-01 | 98.1% | 82.2% |
| 1xr0B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 46.0 | 3.86e-01 | 94.2% | 51.6% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 44.0 | 3.05e-01 | 82.7% | 50.9% |
| 5i47B02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 38.0 | 3.61e-01 | 78.8% | 56.7% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.56 | 42.0 | 3.58e-01 | 82.7% | 85.4% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 37.0 | 3.31e-01 | 71.2% | 50.0% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.53 | 43.0 | 3.26e-01 | 100.0% | 39.2% |
| 5uayA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 43.0 | 3.73e-01 | 90.4% | 73.2% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.53 | 43.0 | 2.99e-01 | 100.0% | 42.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.51e-01 | 100.0% | 80.8% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 44.0 | 2.79e-01 | 98.1% | 85.6% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.72e-01 | 96.2% | 96.6% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.53 | 44.0 | 3.35e-01 | 96.2% | 39.8% |
| 7kggC02 | 3.30.2090.10 | Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | 0.53 | 35.0 | 3.02e-01 | 71.2% | 65.2% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 37.0 | 3.00e-01 | 80.8% | 42.3% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.44e-01 | 100.0% | 65.8% |
| 2n8lA00 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 46.0 | 3.10e-01 | 100.0% | 28.8% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 42.0 | 3.39e-01 | 100.0% | 76.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3692200 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.73 | 57.0 | 3.87e-01 | 86.5% | 30.0% |
| 4023956 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.68 | 51.0 | 3.86e-01 | 86.5% | 33.1% |
| 3778928 | 5050.1.1.22 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like | 0.68 | 45.0 | 2.61e-01 | 100.0% | 7.6% |
| 3734132 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.67 | 48.0 | 3.01e-01 | 78.8% | 13.3% |
| 4199985 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.65 | 53.0 | 3.35e-01 | 96.2% | 41.0% |
| 1872685 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.64 | 53.0 | 3.20e-01 | 98.1% | 34.4% |
| 1117759 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.64 | 52.0 | 3.38e-01 | 96.2% | 28.3% |
| 4995788 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.62 | 50.0 | 5.02e-01 | 100.0% | 88.7% |
| 4946767 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.62 | 47.0 | 3.08e-01 | 100.0% | 19.1% |
| 5027341 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 53.0 | 3.82e-01 | 98.1% | 58.7% |
| 5077402 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.62 | 50.0 | 3.59e-01 | 100.0% | 30.8% |
| 4958102 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 41.0 | 3.92e-01 | 73.1% | 56.9% |
| 3271085 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.61 | 53.0 | 2.97e-01 | 100.0% | 13.3% |
| 3508428 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 49.0 | 3.47e-01 | 94.2% | 27.2% |
| 4833097 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.60 | 50.0 | 3.92e-01 | 98.1% | 41.8% |
| 3514906 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 42.0 | 2.87e-01 | 75.0% | 20.5% |
| 4026519 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.59 | 43.0 | 3.33e-01 | 82.7% | 37.8% |
| 4951717 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 41.0 | 3.72e-01 | 75.0% | 73.3% |
| 5077859 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.59 | 49.0 | 3.13e-01 | 100.0% | 27.0% |
| 4969691 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.58 | 50.0 | 3.26e-01 | 100.0% | 61.6% |
| 3883105 | 3226.1.1.1 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease | 0.58 | 49.0 | 2.85e-01 | 94.2% | 10.2% |
| 3921728 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 42.0 | 3.22e-01 | 76.9% | 34.8% |
| 3691694 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 48.0 | 3.79e-01 | 100.0% | 46.4% |
| 3924318 | 6166.1.1.0 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 | 0.57 | 45.0 | 3.04e-01 | 86.5% | 64.6% |
| 3178436 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.57 | 45.0 | 2.81e-01 | 94.2% | 99.4% |
| 3627409 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.56 | 45.0 | 3.00e-01 | 86.5% | 63.5% |
| 3338778 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 47.0 | 3.10e-01 | 100.0% | 22.4% |
| 3163963 | 3326.1.1.1 ↗ | alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind | 0.56 | 46.0 | 3.76e-01 | 100.0% | 82.7% |
| 3587631 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.55 | 46.0 | 3.37e-01 | 100.0% | 34.3% |
| 5046521 | 3326.1.1.1 ↗ | alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind | 0.55 | 44.0 | 3.58e-01 | 100.0% | 80.0% |
| 4027270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 42.0 | 2.91e-01 | 96.2% | 21.3% |
| 1828346 | 1063.1.1.1 ↗ | alpha complex topology › Tegument protein U14 › Tegument protein U14 › Tegument protein U14 › Herpes_pp85 | 0.55 | 49.0 | 2.83e-01 | 100.0% | 30.8% |
| 3229557 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.55 | 48.0 | 2.87e-01 | 100.0% | 19.5% |
| 3939904 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 46.0 | 2.64e-01 | 98.1% | 13.6% |
| 4418047 | 7523.1.1.46 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lipoprotein_10+Lipoprotein_X | 0.54 | 44.0 | 2.63e-01 | 92.3% | 78.9% |
| 2757968 | 304.48.1.12 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mononeg_RNA_pol | 0.54 | 43.0 | 2.93e-01 | 94.2% | 52.0% |
| 3937515 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 38.0 | 2.39e-01 | 100.0% | 12.1% |
| 4461866 | 3326.1.1.1 ↗ | alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind | 0.54 | 44.0 | 3.62e-01 | 100.0% | 72.7% |
| 3939487 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.53 | 38.0 | 3.06e-01 | 76.9% | 73.0% |
| 4030290 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 45.0 | 2.67e-01 | 94.2% | 62.6% |
| 3589151 | 829.1.1.2 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 | 0.52 | 43.0 | 3.17e-01 | 88.5% | 56.0% |
| 5040059 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.45e-01 | 100.0% | 68.7% |
| 5078830 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 40.0 | 2.65e-01 | 94.2% | 34.3% |
| 1888906 | 2002.1.1.39 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_3 | 0.51 | 44.0 | 2.64e-01 | 98.1% | 72.9% |
| 4944813 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.51 | 40.0 | 2.95e-01 | 100.0% | 64.3% |
| 3446538 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.51 | 43.0 | 2.57e-01 | 100.0% | 31.5% |
| 4995220 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.50 | 42.0 | 3.33e-01 | 90.4% | 94.0% |