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OR757455.1__WQY99873.1__X__00012

Bact-Vir

OR757455.1__WQY99873.1__X__00012

Identity

Accession:
OR757455 ↗
Kingdom:
phage

Quality

70.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Uetakevirus› Salmonella_phage_VB_ST_E15

TaxID: 3097436

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 415-483
PDB
Domain cluster: rep: NC_004775.2__NP_848223.1__epsilon15p15__00016__D780-840
D2 medium residues 221-335
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pw4A02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.57 40.0 3.31e-01 73.0% 66.5%
2b8iA00 1.20.1280.100 Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain 0.54 36.0 4.16e-01 70.4% 100.0%
1ynbA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 38.0 3.36e-01 73.0% 92.2%
1xioA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 44.0 3.60e-01 89.6% 84.8%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 39.0 3.71e-01 77.4% 87.1%
7k18A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.52 46.0 4.39e-01 100.0% 94.0%
7sf7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 43.0 3.31e-01 93.0% 81.2%
4c3eM00 1.20.120.1350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain 0.50 36.0 3.23e-01 85.2% 53.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3925495 189.1.1.1 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RasGAP 0.56 44.0 3.03e-01 82.6% 53.8%
184529 198.3.1.1 ↗ alpha arrays › Saposin-like › PAS factor › PAS factor › Pas_Saposin 0.54 36.0 4.16e-01 70.4% 100.0%
5036051 4095.1.1.1 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.54 38.0 3.14e-01 74.8% 85.0%
3723337 109.4.1.33 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT 0.50 35.0 2.89e-01 73.0% 74.2%