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OR777151.1__WPM94297.1__VB1_CDS0048__00048
Bact-VirOR777151.1__WPM94297.1__VB1_CDS0048__00048
Identity
- Accession:
- OR777151 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Taxonomy
TaxID: 3092169
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-73
Domain cluster:
rep: MH651168.1__AXQ62964.1__SEA_ASHERTHEMAN_57__00057__D3-84
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 53.0 | 5.13e-01 | 91.5% | 96.3% |
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 52.0 | 5.30e-01 | 98.6% | 95.7% |
| 7swlB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 52.0 | 4.74e-01 | 97.2% | 97.1% |
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.61 | 41.0 | 4.62e-01 | 70.4% | 92.7% |
| 3da1A03 | 1.10.8.870 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain | 0.61 | 47.0 | 3.98e-01 | 98.6% | 47.1% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 49.0 | 5.04e-01 | 98.6% | 98.5% |
| 2q9rA01 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.59 | 44.0 | 3.21e-01 | 78.9% | 90.8% |
| 1wwiA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.59 | 49.0 | 4.05e-01 | 100.0% | 99.3% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 39.0 | 3.64e-01 | 71.8% | 89.7% |
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.55 | 38.0 | 3.42e-01 | 71.8% | 87.1% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.55 | 41.0 | 3.39e-01 | 80.3% | 89.5% |
| 3h87B00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.55 | 40.0 | 3.27e-01 | 94.4% | 40.6% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 44.0 | 4.17e-01 | 90.1% | 94.1% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 36.0 | 3.08e-01 | 70.4% | 82.0% |
| 6elqA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 35.0 | 2.73e-01 | 71.8% | 81.8% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 42.0 | 2.93e-01 | 100.0% | 58.6% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.51 | 37.0 | 3.71e-01 | 77.5% | 83.3% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 35.0 | 3.36e-01 | 70.4% | 81.9% |
| 5v07Z02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 37.0 | 3.63e-01 | 91.5% | 70.5% |
| 4rw0A00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 40.0 | 3.17e-01 | 94.4% | 98.4% |
| 2ex3B02 | 1.20.1270.230 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain | 0.50 | 41.0 | 3.98e-01 | 97.2% | 90.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1556747 | 148.1.3.113 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C | 0.71 | 61.0 | 4.97e-01 | 100.0% | 66.9% |
| 3311758 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.68 | 58.0 | 5.43e-01 | 97.2% | 94.4% |
| 3887959 | 103.1.1.53 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TTC3_9th | 0.67 | 48.0 | 5.28e-01 | 93.0% | 98.2% |
| 5077706 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 55.0 | 5.08e-01 | 100.0% | 86.0% |
| 3414602 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 53.0 | 5.23e-01 | 97.2% | 94.7% |
| 5030947 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 51.0 | 5.29e-01 | 93.0% | 100.0% |
| 3630661 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 52.0 | 5.06e-01 | 97.2% | 83.7% |
| 4471800 | 148.1.3.237 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30483 | 0.63 | 51.0 | 5.03e-01 | 100.0% | 88.0% |
| 4003682 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 51.0 | 5.08e-01 | 97.2% | 90.7% |
| 3387896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 51.0 | 5.18e-01 | 98.6% | 97.1% |
| 4027331 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.61 | 49.0 | 4.32e-01 | 88.7% | 59.0% |
| 5077480 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.61 | 50.0 | 4.64e-01 | 88.7% | 70.0% |
| 3273063 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.61 | 43.0 | 3.59e-01 | 76.1% | 87.4% |
| 4950656 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.60 | 40.0 | 3.33e-01 | 70.4% | 67.7% |
| 3708209 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 49.0 | 4.91e-01 | 98.6% | 92.0% |
| 5065464 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.59 | 49.0 | 4.48e-01 | 93.0% | 69.5% |
| 3727351 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.59 | 49.0 | 3.12e-01 | 93.0% | 94.4% |
| 3786419 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 34.0 | 3.18e-01 | 97.2% | 45.6% |
| 3977168 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 47.0 | 4.67e-01 | 91.5% | 97.3% |
| 4121495 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 48.0 | 4.81e-01 | 100.0% | 93.3% |
| 3297107 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.57 | 39.0 | 3.56e-01 | 70.4% | 91.6% |
| 3942493 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 47.0 | 4.73e-01 | 98.6% | 96.0% |
| 3858695 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 39.0 | 3.74e-01 | 73.2% | 97.6% |
| 3955872 | 101.1.2.567 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF222 | 0.56 | 46.0 | 3.75e-01 | 97.2% | 48.0% |
| 5029457 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.55 | 44.0 | 4.33e-01 | 97.2% | 82.5% |
| 3927265 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.55 | 43.0 | 4.18e-01 | 88.7% | 80.0% |
| 3822810 | 1128.1.1.13 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 | 0.54 | 42.0 | 3.80e-01 | 85.9% | 68.0% |
| 4040119 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 43.0 | 4.33e-01 | 98.6% | 92.0% |
| 5015200 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 41.0 | 2.71e-01 | 87.3% | 91.9% |
| 4680851 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.52 | 39.0 | 3.43e-01 | 85.9% | 52.5% |
| 55476 | 4192.1.1.0 ↗ | alpha bundles › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain | 0.51 | 43.0 | 4.18e-01 | 97.2% | 85.0% |
| 4071 | 191.1.1.38 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_5-like | 0.51 | 41.0 | 3.43e-01 | 88.7% | 95.2% |
| 3767057 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 42.0 | 4.21e-01 | 100.0% | 93.3% |
| 4031309 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.50 | 41.0 | 3.87e-01 | 98.6% | 73.3% |
| 4943554 | 103.7.1.0 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 | 0.50 | 38.0 | 3.72e-01 | 85.9% | 77.5% |
| 3882 | 4192.1.1.1 ↗ | alpha bundles › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain › DNA terminal protein C-terminal domain › Phi-29_GP3 | 0.50 | 41.0 | 3.99e-01 | 97.2% | 91.3% |
D2
medium
residues 77-148
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1un8A02 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.73 | 52.0 | 3.76e-01 | 75.0% | 44.8% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.72 | 51.0 | 3.56e-01 | 73.6% | 51.6% |
| 3dzvA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.72 | 50.0 | 3.37e-01 | 72.2% | 57.2% |
| 2nwhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.69 | 48.0 | 3.15e-01 | 73.6% | 41.0% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.58 | 39.0 | 3.67e-01 | 70.8% | 90.2% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 40.0 | 4.07e-01 | 73.6% | 78.6% |
| 1v9mA02 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.53 | 37.0 | 3.35e-01 | 73.6% | 64.4% |
| 5bu9A00 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.53 | 37.0 | 2.43e-01 | 75.0% | 50.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958530 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 55.0 | 4.80e-01 | 72.2% | 84.8% |
| 5070459 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.76 | 53.0 | 3.89e-01 | 72.2% | 55.6% |
| 4961860 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 53.0 | 4.22e-01 | 73.6% | 57.1% |
| 3925710 | 148.1.3.10 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_6 | 0.75 | 54.0 | 4.76e-01 | 76.4% | 84.8% |
| 3959831 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.73 | 53.0 | 4.14e-01 | 76.4% | 94.0% |
| 3580700 | 148.1.3.10 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_6 | 0.73 | 51.0 | 4.47e-01 | 72.2% | 82.9% |
| 4948947 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.73 | 51.0 | 3.74e-01 | 73.6% | 99.5% |
| 4149 | 590.1.1.1 ↗ | alpha bundles › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Dak2 | 0.73 | 52.0 | 3.68e-01 | 75.0% | 41.5% |
| 4943010 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.70 | 48.0 | 4.60e-01 | 72.2% | 83.5% |
| 5023436 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.66 | 53.0 | 3.76e-01 | 90.3% | 57.4% |
| 5009818 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.60 | 42.0 | 3.21e-01 | 73.6% | 91.7% |