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OR836606.1__WRM43472.1__X__00141
Bact-VirOR836606.1__WRM43472.1__X__00141
Identity
- Accession:
- OR836606 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-73
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.69 | 57.0 | 4.66e-01 | 89.0% | 51.1% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.68 | 59.0 | 3.68e-01 | 100.0% | 66.7% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 58.0 | 3.88e-01 | 98.6% | 51.8% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 58.0 | 3.80e-01 | 100.0% | 63.7% |
| 2dg1C00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 56.0 | 3.76e-01 | 98.6% | 65.0% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 53.0 | 3.58e-01 | 93.2% | 76.0% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 55.0 | 3.71e-01 | 100.0% | 65.8% |
| 1r75A00 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 49.0 | 4.32e-01 | 84.9% | 86.4% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 52.0 | 3.59e-01 | 98.6% | 70.0% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 53.0 | 3.53e-01 | 100.0% | 68.5% |
| 3vgzC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 52.0 | 3.51e-01 | 100.0% | 66.9% |
| 3ffvA00 | 3.40.1580.20 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein | 0.62 | 52.0 | 3.86e-01 | 91.8% | 38.1% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 51.0 | 3.33e-01 | 100.0% | 59.7% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 44.0 | 2.96e-01 | 79.5% | 84.1% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.59 | 42.0 | 3.78e-01 | 75.3% | 89.5% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.59 | 50.0 | 3.51e-01 | 100.0% | 74.5% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 44.0 | 3.00e-01 | 84.9% | 91.2% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.58 | 40.0 | 3.48e-01 | 71.2% | 59.3% |
| 2gcjA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.58 | 40.0 | 3.35e-01 | 72.6% | 100.0% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.58 | 39.0 | 3.81e-01 | 71.2% | 66.3% |
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.56 | 38.0 | 3.14e-01 | 71.2% | 83.3% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 38.0 | 2.67e-01 | 72.6% | 50.0% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.55 | 41.0 | 3.19e-01 | 83.6% | 71.7% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.53 | 43.0 | 3.22e-01 | 89.0% | 82.7% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 39.0 | 3.79e-01 | 79.5% | 98.8% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.52 | 36.0 | 3.07e-01 | 74.0% | 67.4% |
| 4b8eB00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.52 | 43.0 | 3.17e-01 | 90.4% | 62.5% |
| 4m00A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 2.88e-01 | 86.3% | 65.5% |
| 6lf2B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 36.0 | 3.03e-01 | 72.6% | 90.3% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.55e-01 | 83.6% | 80.4% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 2.81e-01 | 72.6% | 70.1% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 40.0 | 3.18e-01 | 91.8% | 81.6% |
| 4ifsA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.50 | 36.0 | 3.06e-01 | 78.1% | 100.0% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.50 | 40.0 | 3.47e-01 | 91.8% | 73.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955652 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 64.0 | 4.10e-01 | 98.6% | 53.8% |
| 3637203 | 5.1.4.254 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N | 0.69 | 54.0 | 3.30e-01 | 84.9% | 36.1% |
| 3283531 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.69 | 58.0 | 4.00e-01 | 93.2% | 74.9% |
| 3937192 | 5.1.11.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Det1 | 0.69 | 54.0 | 3.40e-01 | 84.9% | 43.7% |
| 3486200 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.69 | 60.0 | 3.73e-01 | 100.0% | 64.0% |
| 4267686 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.67 | 55.0 | 3.72e-01 | 93.2% | 74.9% |
| 3366964 | 5.1.4.94 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 | 0.67 | 57.0 | 3.84e-01 | 100.0% | 81.6% |
| 3781083 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.67 | 58.0 | 3.55e-01 | 100.0% | 56.5% |
| 3300916 | 5.1.4.231 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_3 | 0.66 | 55.0 | 3.63e-01 | 91.8% | 69.7% |
| 3207083 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.65 | 56.0 | 3.62e-01 | 98.6% | 45.3% |
| 4039417 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.65 | 54.0 | 3.63e-01 | 93.2% | 76.3% |
| 3951220 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.65 | 55.0 | 3.56e-01 | 95.9% | 48.3% |
| 3308935 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.65 | 56.0 | 3.68e-01 | 100.0% | 51.2% |
| 3324058 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 54.0 | 3.52e-01 | 98.6% | 43.5% |
| 5017944 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 54.0 | 3.64e-01 | 100.0% | 60.6% |
| 4001894 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.64 | 55.0 | 3.18e-01 | 100.0% | 25.2% |
| 4262950 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 56.0 | 3.74e-01 | 100.0% | 57.3% |
| 3734170 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 53.0 | 3.79e-01 | 93.2% | 42.0% |
| 3599279 | 10.15.1.0 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like | 0.63 | 49.0 | 4.05e-01 | 83.6% | 77.7% |
| 3920678 | 5.1.5.41 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 | 0.63 | 54.0 | 3.53e-01 | 100.0% | 68.6% |
| 3266906 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.63 | 53.0 | 3.62e-01 | 98.6% | 65.3% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.63 | 54.0 | 3.48e-01 | 100.0% | 73.6% |
| 5078978 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 51.0 | 3.59e-01 | 95.9% | 72.1% |
| 3643064 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.61 | 51.0 | 3.73e-01 | 93.2% | 76.1% |
| 3645253 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.61 | 53.0 | 3.60e-01 | 100.0% | 77.2% |
| 3379168 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.61 | 43.0 | 4.51e-01 | 74.0% | 100.0% |
| 4003966 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.61 | 50.0 | 3.89e-01 | 93.2% | 85.3% |
| 3382445 | 5.1.2.59 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_NOL10_N | 0.61 | 48.0 | 4.13e-01 | 87.7% | 95.8% |
| 3972677 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.60 | 44.0 | 3.03e-01 | 79.5% | 84.2% |
| 4112222 | 206.1.1.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › AceK_kinase | 0.60 | 44.0 | 2.98e-01 | 79.5% | 84.6% |
| 3229102 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.59 | 41.0 | 2.91e-01 | 74.0% | 39.2% |
| 4130659 | 206.1.1.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › AceK_kinase | 0.59 | 43.0 | 2.97e-01 | 79.5% | 85.6% |
| 3230955 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 42.0 | 2.98e-01 | 78.1% | 91.0% |
| 3436173 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 43.0 | 2.90e-01 | 82.2% | 94.2% |
| 3584175 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.58 | 46.0 | 3.47e-01 | 86.3% | 76.6% |
| 3509731 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.55 | 41.0 | 3.02e-01 | 82.2% | 37.3% |
| 3839277 | 241.16.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › protein CagD › protein CagD › CagD | 0.52 | 42.0 | 3.41e-01 | 90.4% | 51.0% |
| 3994301 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.52 | 43.0 | 3.27e-01 | 90.4% | 75.3% |
| 3777744 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.50 | 33.0 | 3.12e-01 | 91.8% | 54.4% |
D2
medium
residues 74-191
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vk1A02 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.52 | 38.0 | 3.70e-01 | 76.3% | 75.4% |
| 3bv8A00 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 23.0 | 2.69e-01 | 75.4% | 52.9% |
| 3b1dA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 43.0 | 3.53e-01 | 92.4% | 90.2% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 27.0 | 3.33e-01 | 88.1% | 84.3% |
D3
medium
residues 305-366
Domain cluster:
rep: OM728297.1__WCS68316.1__Goe21_02060__00206__D909-967