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OR844384.1__WQY91271.1__X__00009

Bact-Vir

OR844384.1__WQY91271.1__X__00009

Identity

Accession:
OR844384 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Hafnia_phage_TS33

TaxID: 3110108

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: rep: NC_069155.1__YP_010582714.1__PF629_gp06__00006__D2-90
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.69 54.0 4.34e-01 85.9% 97.9%
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.66 50.0 3.70e-01 98.6% 31.5%
3lzkB00 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.66 57.0 3.71e-01 100.0% 60.8%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.98e-01 93.0% 88.0%
1asuA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.63 49.0 3.82e-01 85.9% 65.4%
2fdbN00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 51.0 4.00e-01 90.1% 89.9%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 4.15e-01 87.3% 59.6%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.22e-01 93.0% 72.9%
4a6fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.49e-01 93.0% 87.6%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.40e-01 93.0% 76.4%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.29e-01 93.0% 77.8%
1eazA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.46e-01 93.0% 86.4%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 3.94e-01 93.0% 90.0%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 4.28e-01 97.2% 83.6%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.24e-01 93.0% 91.4%
2y7bA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.91e-01 95.8% 81.3%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.04e-01 93.0% 77.9%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 43.0 2.89e-01 88.7% 48.2%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.56 39.0 3.25e-01 76.1% 89.2%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.92e-01 97.2% 80.2%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 3.97e-01 97.2% 73.4%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.06e-01 94.4% 73.4%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.80e-01 93.0% 66.9%
7z6eA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.90e-01 95.8% 83.6%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 2.98e-01 100.0% 89.0%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.81e-01 93.0% 67.7%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 4.03e-01 93.0% 78.4%
2coaA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.83e-01 95.8% 83.9%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.89e-01 97.2% 73.9%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.53 45.0 3.64e-01 98.6% 85.5%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.64e-01 97.2% 65.2%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 3.77e-01 95.8% 69.4%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.80e-01 95.8% 78.0%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.52e-01 95.8% 54.4%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.73e-01 93.0% 70.4%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.90e-01 97.2% 84.1%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.70e-01 94.4% 70.2%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 4.25e-01 95.8% 98.8%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 4.02e-01 97.2% 85.0%
4ifsA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.52 46.0 3.77e-01 100.0% 69.7%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 46.0 2.95e-01 100.0% 21.3%
1wz9A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 37.0 3.06e-01 78.9% 90.8%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 44.0 2.92e-01 100.0% 22.4%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.74e-01 93.0% 77.7%
1ewqA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.51 42.0 3.60e-01 93.0% 77.1%
1dkiC01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.51 35.0 2.64e-01 71.8% 73.7%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.68e-01 97.2% 82.1%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 40.0 2.65e-01 88.7% 31.6%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4002279 2485.1.1.90 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_PDIA6_C 0.74 57.0 4.48e-01 81.7% 75.9%
3626626 2485.1.1.109 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26957 0.73 53.0 4.21e-01 78.9% 74.7%
3222552 2485.1.1.90 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_PDIA6_C 0.73 56.0 4.52e-01 83.1% 80.7%
3271916 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.72 53.0 4.40e-01 78.9% 83.2%
3295296 4.8.1.7 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE 0.68 40.0 4.81e-01 76.1% 93.3%
3782735 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 52.0 3.56e-01 97.2% 56.5%
2445189 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 52.0 4.36e-01 93.0% 80.2%
3935202 220.1.1.161 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.62 53.0 4.41e-01 93.0% 75.8%
3744119 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.61 49.0 3.59e-01 100.0% 32.1%
3585687 2485.1.1.139 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26968, PF26973, PF26976 0.60 45.0 2.68e-01 83.1% 20.6%
3471154 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 51.0 4.27e-01 93.0% 83.3%
3402011 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 50.0 4.54e-01 95.8% 84.0%
3663043 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.24e-01 97.2% 84.8%
3863489 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.19e-01 93.0% 67.5%
3301560 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.59 52.0 3.35e-01 100.0% 99.1%
3257362 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 50.0 4.30e-01 93.0% 79.1%
3568384 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 4.05e-01 93.0% 76.2%
None — 0.59 50.0 3.93e-01 93.0% 75.2%
3267508 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 49.0 4.42e-01 93.0% 83.0%
3628889 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.58 49.0 3.25e-01 93.0% 27.6%
3252283 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 48.0 4.08e-01 95.8% 72.0%
3560455 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.10e-01 91.5% 24.5%
3255028 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 48.0 3.73e-01 95.8% 55.9%
3481724 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.21e-01 93.0% 84.5%
3389929 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.99e-01 97.2% 67.1%
3991560 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 48.0 4.47e-01 95.8% 84.2%
3899370 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.58 49.0 4.08e-01 93.0% 65.0%
3720410 220.1.1.57 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 0.58 48.0 3.97e-01 95.8% 68.1%
3507601 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 4.27e-01 97.2% 93.3%
3619347 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 4.05e-01 93.0% 74.8%
3467267 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.56 42.0 4.41e-01 88.7% 89.2%
5067408 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.56 49.0 3.62e-01 98.6% 37.5%
3557698 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.56 47.0 4.22e-01 93.0% 84.0%
3405438 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 47.0 3.67e-01 95.8% 50.6%
3921576 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 44.0 3.59e-01 87.3% 75.0%
3598206 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 38.0 3.33e-01 100.0% 46.4%
3213868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.75e-01 93.0% 74.8%
3505107 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 45.0 3.97e-01 95.8% 73.9%
3347387 220.1.1.113 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_11 0.55 46.0 3.68e-01 97.2% 85.8%
3488136 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 46.0 3.83e-01 95.8% 72.3%
3522958 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.55 49.0 3.13e-01 100.0% 90.7%
3268983 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 46.0 3.97e-01 95.8% 73.0%
3891023 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 45.0 3.46e-01 95.8% 44.4%
3499509 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 45.0 3.93e-01 97.2% 74.2%
3248516 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 45.0 4.14e-01 97.2% 87.0%
3800237 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 3.93e-01 97.2% 63.2%
3718039 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 3.59e-01 100.0% 90.9%
3487889 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.90e-01 97.2% 78.3%
3532622 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 45.0 3.90e-01 97.2% 73.3%
3252797 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 45.0 3.95e-01 95.8% 85.5%
3271042 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 45.0 4.07e-01 95.8% 82.0%
3723092 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.54 45.0 3.79e-01 93.0% 86.7%
4543309 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 45.0 3.92e-01 97.2% 72.2%
3884136 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 3.61e-01 93.0% 73.3%
3704944 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 4.01e-01 97.2% 80.0%
3693093 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.65e-01 93.0% 81.6%
3424661 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 44.0 2.88e-01 95.8% 82.9%
3558010 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 43.0 3.73e-01 95.8% 75.8%
3570692 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 43.0 3.78e-01 95.8% 67.8%
3800494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 45.0 3.66e-01 97.2% 66.4%
5032559 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 40.0 3.78e-01 85.9% 100.0%
3922015 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.52 42.0 3.36e-01 100.0% 45.9%
5016546 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 41.0 4.10e-01 95.8% 82.7%
3268229 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.68e-01 88.7% 75.2%
3936383 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 44.0 3.15e-01 100.0% 73.6%
3937459 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.82e-01 95.8% 87.0%
4955729 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 44.0 3.39e-01 100.0% 52.4%
3618718 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.69e-01 97.2% 75.7%
3903728 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.74e-01 94.4% 79.0%
3198165 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 40.0 2.68e-01 91.5% 58.8%
3407757 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.50 42.0 3.50e-01 95.8% 61.5%