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OR921208.1__WRQ11876.1__X__00049

Bact-Vir

OR921208.1__WRQ11876.1__X__00049

Identity

Accession:
OR921208 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Skatevirus› Salmonella_phage_PJN025

TaxID: 3110415

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-51
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05265.21 best DUF723 45.9 8.30e-12 100.0% 69.8%
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 51.0 5.09e-01 72.7% 60.9%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 51.0 5.03e-01 77.3% 63.8%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 4.87e-01 77.3% 58.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 50.0 4.81e-01 79.5% 59.6%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.74 49.0 4.61e-01 77.3% 55.6%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 51.0 4.61e-01 77.3% 53.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 49.0 4.18e-01 79.5% 42.5%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 4.61e-01 77.3% 58.8%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 47.0 4.33e-01 79.5% 50.8%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.70 56.0 4.22e-01 88.6% 37.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 48.0 3.98e-01 77.3% 39.5%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 46.0 4.05e-01 77.3% 44.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 46.0 4.10e-01 79.5% 47.8%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.67 49.0 3.95e-01 79.5% 83.7%
3puaA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.67 50.0 3.01e-01 81.8% 12.6%
2rghA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 44.0 2.72e-01 70.5% 12.9%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 48.0 3.78e-01 84.1% 36.6%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 50.0 4.51e-01 88.6% 80.0%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 44.0 2.77e-01 70.5% 12.3%
3rauA00 1.25.40.280 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains 0.64 51.0 3.12e-01 100.0% 43.6%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.64 49.0 3.94e-01 88.6% 42.6%
2r0cA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 44.0 2.74e-01 70.5% 12.2%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 43.0 2.53e-01 70.5% 7.5%
1y0nA00 1.10.10.610 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like 0.63 45.0 3.97e-01 79.5% 91.5%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.15e-01 81.8% 61.5%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 48.0 3.82e-01 88.6% 40.4%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.63 45.0 2.92e-01 81.8% 19.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 43.0 4.20e-01 77.3% 62.7%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 45.0 2.62e-01 77.3% 8.3%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 47.0 3.77e-01 97.7% 40.8%
2j3lA01 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 47.0 3.61e-01 97.7% 35.4%
2fgeA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 49.0 3.13e-01 100.0% 92.8%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 46.0 3.73e-01 88.6% 42.9%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 44.0 4.23e-01 84.1% 69.1%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 3.91e-01 88.6% 91.1%
2y8nB02 2.20.70.100 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 41.0 4.19e-01 90.9% 75.0%
4frfA00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.58 44.0 2.91e-01 88.6% 39.3%
2xocA01 3.30.40.140 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.58 39.0 3.30e-01 70.5% 60.3%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 3.83e-01 95.5% 90.1%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 41.0 3.05e-01 77.3% 27.6%
6yllA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 46.0 3.85e-01 93.2% 100.0%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.57 41.0 2.96e-01 84.1% 24.5%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 3.77e-01 97.7% 56.2%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 42.0 3.64e-01 81.8% 64.0%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 39.0 2.31e-01 77.3% 8.1%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 3.88e-01 88.6% 79.7%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.55 41.0 3.18e-01 90.9% 51.7%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 40.0 2.48e-01 86.4% 20.6%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 42.0 3.87e-01 93.2% 78.1%
2xzm500 3.30.1740.20 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Ribosomal protein S26 0.54 37.0 2.97e-01 75.0% 68.4%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 3.43e-01 97.7% 60.2%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.52 37.0 3.00e-01 79.5% 92.0%
1tocR02 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.52 34.0 3.15e-01 70.5% 50.0%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 37.0 2.87e-01 81.8% 55.7%
4yy8A02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 37.0 2.37e-01 86.4% 13.1%
7qzqA01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.51 37.0 2.33e-01 88.6% 14.4%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.51 35.0 2.51e-01 81.8% 22.5%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.50 36.0 2.31e-01 86.4% 13.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3620947 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 58.0 5.44e-01 84.1% 74.5%
3902975 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 53.0 4.84e-01 81.8% 55.0%
3928262 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 50.0 4.55e-01 77.3% 51.7%
3598807 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 65.0 5.64e-01 100.0% 81.2%
4465307 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 50.0 4.83e-01 84.1% 62.0%
3343242 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 50.0 5.20e-01 72.7% 80.0%
3749194 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 49.0 4.40e-01 79.5% 50.0%
4163844 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.72 54.0 4.25e-01 84.1% 41.1%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 49.0 4.60e-01 84.1% 60.0%
4962338 375.1.1.234 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_PaaD 0.69 44.0 4.63e-01 70.5% 72.5%
3262212 7502.1.1.7 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.68 52.0 4.00e-01 88.6% 35.5%
4636455 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.68 46.0 4.60e-01 70.5% 68.9%
4937436 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.66 47.0 2.88e-01 79.5% 11.9%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 4.43e-01 84.1% 61.8%
5079023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.55e-01 81.8% 71.1%
4650543 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.65 49.0 3.90e-01 88.6% 39.8%
5049811 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.65 46.0 2.70e-01 77.3% 9.2%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.24e-01 79.5% 55.4%
4011699 4224.1.1.0 ↗ few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger 0.63 52.0 4.76e-01 93.2% 85.0%
4168836 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 50.0 4.31e-01 88.6% 77.1%
4927532 219.1.1.51 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.63 44.0 3.30e-01 81.8% 27.2%
5032233 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 3.93e-01 100.0% 76.5%
5044374 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 4.56e-01 88.6% 89.1%
None — 0.62 42.0 2.46e-01 72.7% 8.3%
3406047 2.1.1.81 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.62 46.0 3.58e-01 84.1% 93.3%
2157238 5.1.12.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains › PQQ_2 0.61 38.0 2.67e-01 70.5% 18.2%
4979113 620.1.1.6 ↗ alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.61 45.0 3.17e-01 84.1% 52.9%
3934671 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.60 48.0 3.94e-01 90.9% 58.8%
5044393 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 42.0 3.88e-01 77.3% 63.3%
3602060 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 41.0 2.70e-01 77.3% 16.4%
5017134 208.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.59 41.0 2.76e-01 81.8% 16.4%
5049534 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.34e-01 75.0% 45.9%
5079728 208.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.58 40.0 2.75e-01 81.8% 17.4%
3891314 593.1.1.1 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 0.57 39.0 2.51e-01 72.7% 14.2%
3258814 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 46.0 3.56e-01 93.2% 87.6%
4945010 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 42.0 2.62e-01 86.4% 15.8%
4381486 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.56 41.0 3.46e-01 88.6% 42.0%
4582456 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.56 43.0 3.83e-01 88.6% 75.7%
4429356 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.56 45.0 4.07e-01 93.2% 75.4%
4579534 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.56 42.0 3.87e-01 88.6% 78.5%
3640623 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.56 40.0 3.24e-01 84.1% 75.2%
4043601 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.56 42.0 3.86e-01 88.6% 80.0%
3464671 4.1.1.136 ↗ beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.55 37.0 3.36e-01 81.8% 44.3%
3342083 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 42.0 2.61e-01 88.6% 23.1%
3928189 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.55 40.0 2.59e-01 77.3% 15.6%
3628119 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.54 42.0 3.60e-01 90.9% 65.0%
4120496 377.1.1.8 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S26e 0.54 38.0 3.28e-01 75.0% 58.7%
3688923 2.1.1.89 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term 0.54 45.0 3.90e-01 100.0% 84.0%
3717387 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.53 45.0 2.90e-01 100.0% 31.3%
2028019 4.1.1.136 ↗ beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.53 37.0 3.36e-01 79.5% 51.5%
3935356 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.53 36.0 2.77e-01 72.7% 33.3%
4030552 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.52 39.0 3.25e-01 84.1% 58.8%
5082482 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.52 38.0 3.25e-01 79.5% 48.0%
3215090 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 40.0 3.72e-01 100.0% 84.6%
3519023 3964.1.1.1 ↗ beta meanders › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE 0.51 36.0 3.04e-01 75.0% 40.0%
3474601 3710.1.1.0 ↗ alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain 0.50 40.0 2.94e-01 90.9% 54.5%
4025894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 39.0 2.93e-01 100.0% 34.9%
5038830 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.50 38.0 3.00e-01 97.7% 38.0%
4968405 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.50 38.0 2.93e-01 97.7% 34.5%
3928962 4161.1.1.2 ↗ beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N 0.50 41.0 2.96e-01 100.0% 43.3%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.50 39.0 3.57e-01 95.5% 78.5%
D2 high residues 256-350
PDB
Domain cluster: rep: gwa1_scaffold_0_prodigal-single.1__X__X__00404__D55-146
D3 medium residues 86-156
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t7lA02 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.65 50.0 3.19e-01 83.1% 47.0%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.63 49.0 4.95e-01 84.5% 84.5%
1c7uA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.62 42.0 4.38e-01 76.1% 79.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 38.0 3.75e-01 74.6% 60.0%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 41.0 2.65e-01 70.4% 81.7%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.58 38.0 3.44e-01 70.4% 50.5%
4hr6B02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.58 39.0 3.71e-01 70.4% 62.8%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 34.0 2.79e-01 76.1% 33.8%
4ubtD00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 43.0 2.73e-01 87.3% 51.9%
2kmgA00 3.30.70.3580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein 0.53 40.0 3.19e-01 80.3% 76.8%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.52 37.0 3.32e-01 74.6% 56.8%
2xfaA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.51 36.0 2.99e-01 77.5% 86.7%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.11e-01 78.9% 82.7%
3lkmA02 3.20.200.10 Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase 0.50 34.0 3.22e-01 74.6% 56.7%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4074457 3681.1.1.0 ↗ a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit 0.74 55.0 4.44e-01 77.5% 57.6%
3783976 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.70 58.0 5.36e-01 90.1% 76.7%
4023956 3871.1.1.1 ↗ alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.70 49.0 3.97e-01 73.2% 43.8%
5071736 2004.1.1.277 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HerA_C 0.65 47.0 2.85e-01 74.6% 20.8%
4020381 4018.1.1.1 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase 0.64 48.0 3.54e-01 80.3% 61.1%
3820897 109.4.1.1682 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHM7_cyt 0.64 44.0 4.51e-01 76.1% 74.3%
2037203 223.3.1.3 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.61 41.0 4.68e-01 71.8% 96.1%
4329262 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.60 44.0 2.78e-01 77.5% 90.3%
3924089 198.1.1.4 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 0.59 40.0 3.21e-01 70.4% 92.4%
1641233 4019.1.1.3 ↗ alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.57 41.0 3.14e-01 76.1% 96.4%
3959713 3702.1.1.0 ↗ beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain 0.57 43.0 2.89e-01 81.7% 84.0%
5031467 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.54 39.0 2.88e-01 77.5% 80.0%
3937694 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.54 39.0 2.62e-01 76.1% 58.9%
4356968 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.54 37.0 2.79e-01 71.8% 37.1%
2647598 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.54 36.0 2.67e-01 88.7% 26.9%
1766108 223.3.1.3 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 38.0 3.90e-01 74.6% 80.0%
3252574 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.53 47.0 3.23e-01 98.6% 30.2%
D4 medium residues 159-251
PDB
Domain cluster: representative
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3602679 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.62 55.0 4.28e-01 95.7% 76.8%
3519143 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.56 47.0 3.33e-01 93.5% 73.4%
3511604 109.4.1.1715 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TANGO6 0.55 40.0 2.47e-01 75.3% 21.8%
3735243 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.55 46.0 2.96e-01 94.6% 58.8%
4028213 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.56e-01 86.0% 61.5%