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OR941552.1__WQY99843.1__X__00088

Bact-Vir

OR941552.1__WQY99843.1__X__00088

Identity

Accession:
OR941552 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hodgkinviridae› Kozievirus› Microbacterium_phage_MO526

TaxID: 3108092

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57
PDB
Domain cluster: rep: MN586027.1__QGJ93511.1__SEA_MUFASA8_63__00063__D5-52
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.71 58.0 4.91e-01 92.5% 55.2%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.69 41.0 2.82e-01 100.0% 16.6%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.66 51.0 4.38e-01 83.0% 75.9%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 47.0 3.95e-01 79.2% 75.3%
3weeA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 3.76e-01 98.1% 86.9%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 33.0 3.16e-01 81.1% 37.1%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 52.0 4.34e-01 100.0% 96.2%
3f2kB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 53.0 3.72e-01 100.0% 76.0%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.61 48.0 4.21e-01 92.5% 56.2%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.60 51.0 3.87e-01 100.0% 97.1%
4hstA01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.60 48.0 3.61e-01 94.3% 78.8%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 50.0 2.99e-01 100.0% 26.2%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.57 46.0 3.46e-01 90.6% 97.8%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 51.0 3.72e-01 100.0% 79.6%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.67e-01 90.6% 84.3%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 48.0 4.02e-01 98.1% 55.8%
4e9jB01 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 43.0 3.26e-01 86.8% 35.5%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.03e-01 100.0% 41.1%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.06e-01 100.0% 96.5%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 46.0 3.98e-01 100.0% 72.5%
3qu1A00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.55 44.0 3.15e-01 90.6% 82.1%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 45.0 2.84e-01 96.2% 24.4%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.55 41.0 4.14e-01 83.0% 81.5%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.54 38.0 3.78e-01 81.1% 71.9%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.53 45.0 2.73e-01 100.0% 34.6%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.53 43.0 3.49e-01 98.1% 76.3%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.51e-01 100.0% 83.3%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 40.0 2.50e-01 86.8% 33.0%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 2.83e-01 100.0% 40.5%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.73e-01 98.1% 95.5%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.51 39.0 3.68e-01 88.7% 95.8%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 42.0 2.64e-01 100.0% 24.9%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.50 43.0 3.99e-01 100.0% 87.5%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4009818 3268.1.1.1 ↗ a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › XdhC_CoxI 0.63 51.0 4.30e-01 96.2% 52.0%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.63 46.0 4.25e-01 79.2% 87.1%
3500814 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 49.0 3.79e-01 86.8% 88.3%
3582941 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.62 45.0 3.63e-01 77.4% 64.0%
3927236 216.1.1.17 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C 0.61 44.0 3.31e-01 77.4% 50.7%
3520218 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 3.82e-01 92.5% 97.5%
4020256 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 3.69e-01 92.5% 77.7%
3961074 6032.1.1.0 ↗ a+b two layers › DUF3222-like › DUF3222-like › DUF3222-like 0.58 48.0 4.02e-01 98.1% 73.0%
3533574 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 50.0 3.66e-01 98.1% 72.4%
3524527 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.58 46.0 3.75e-01 92.5% 93.6%
3668711 109.4.1.916 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B 0.58 42.0 2.58e-01 79.2% 13.2%
3704939 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.19e-01 100.0% 91.1%
3610595 3131.1.1.3 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRC 0.57 40.0 3.11e-01 79.2% 93.5%
3926600 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 48.0 3.87e-01 100.0% 89.1%
3392311 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.43e-01 98.1% 71.5%
3327182 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.55 40.0 3.56e-01 81.1% 85.9%
3685243 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 47.0 3.03e-01 100.0% 87.4%
3998850 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 46.0 3.74e-01 100.0% 72.7%
3494647 4099.1.1.20 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 0.55 41.0 3.76e-01 90.6% 58.7%
3680814 5.1.4.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.55 45.0 2.81e-01 100.0% 27.7%
3477683 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 2.90e-01 100.0% 44.1%
5001324 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 3.73e-01 98.1% 87.6%
3262248 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.54 46.0 2.76e-01 96.2% 93.4%
3933947 5001.1.1.206 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg, 7TM_GPCR_Srv 0.54 48.0 2.76e-01 100.0% 35.6%
3504319 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 47.0 2.93e-01 100.0% 88.1%
3392217 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 46.0 2.75e-01 100.0% 17.2%
4280539 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.54 46.0 2.56e-01 100.0% 14.6%
3717655 220.1.1.30 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.54 44.0 3.67e-01 94.3% 97.0%
4579655 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.54 44.0 2.67e-01 96.2% 16.0%
3783302 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.53 45.0 3.08e-01 100.0% 34.1%
3533688 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 42.0 3.80e-01 92.5% 62.7%
3579887 5.1.5.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_LRRK2 0.53 45.0 2.88e-01 100.0% 47.7%
3718868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.06e-01 88.7% 69.0%
3272228 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.85e-01 100.0% 37.5%
3952995 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.52 44.0 3.70e-01 100.0% 56.5%
3515664 5.1.4.34 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.52 42.0 2.49e-01 100.0% 21.1%
5077287 304.139.1.2 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs 0.52 45.0 2.92e-01 100.0% 64.9%
3934420 5001.1.1.44 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.52 46.0 3.05e-01 100.0% 43.3%
4431929 4100.1.1.4 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 0.52 43.0 4.05e-01 92.5% 76.9%
3969097 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.52 38.0 3.88e-01 81.1% 82.0%
3624498 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.36e-01 98.1% 72.0%
3939830 5001.1.1.66 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.51 44.0 2.85e-01 100.0% 68.5%
3920905 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.51 38.0 3.06e-01 86.8% 76.6%
3597004 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.51 43.0 3.30e-01 98.1% 81.5%
3801512 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.25e-01 92.5% 87.5%
3471746 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.51 38.0 2.78e-01 83.0% 60.7%
4926953 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.14e-01 86.8% 83.3%
3236050 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.51 39.0 3.13e-01 96.2% 40.9%
3512778 375.1.1.9 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.51 39.0 3.41e-01 94.3% 75.8%