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OR947472.1__WQZ40892.1__X__00024

Bact-Vir

OR947472.1__WQZ40892.1__X__00024

Identity

Accession:
OR947472 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Guelinviridae› Brucesealvirus› Clostridium_phage_vB_CpeP_15N3

TaxID: 3108091

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 112-203
PDB
Domain cluster: rep: MH707426.1__AYJ76496.1__BSP2_019__00019__D239-329
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.62 27.0 3.18e-01 83.7% 57.6%
1kcfB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 48.0 3.69e-01 100.0% 76.8%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.53 46.0 3.28e-01 100.0% 93.1%
1e3mB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.52 45.0 4.06e-01 100.0% 86.3%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.51 37.0 3.17e-01 75.0% 76.2%
1k70A01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.51 35.0 3.31e-01 71.7% 78.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282813 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.62 36.0 3.91e-01 100.0% 67.5%
5022447 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 41.0 3.72e-01 77.2% 99.2%
5022129 2484.1.1.49 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N 0.56 40.0 3.55e-01 75.0% 100.0%
4980468 2484.1.1.338 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family10 0.55 38.0 3.44e-01 72.8% 91.5%
1019 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.54 30.0 3.79e-01 98.9% 96.2%
3573950 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.54 33.0 2.67e-01 96.7% 30.1%
11185 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 37.0 3.56e-01 72.8% 100.0%
4063892 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.52 38.0 3.48e-01 78.3% 96.8%
4293728 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.52 37.0 3.44e-01 77.2% 97.6%
5054600 2484.1.1.10 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.51 37.0 3.53e-01 78.3% 96.5%
4096721 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.51 37.0 3.40e-01 78.3% 96.8%
D2 medium residues 1-60
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05894.19 best Podovirus_Gp16 27.5 2.90e-06 93.3% 13.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5w4zA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.54 45.0 2.73e-01 95.0% 61.2%
3d7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 2.81e-01 100.0% 48.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974371 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.64 44.0 3.05e-01 100.0% 21.0%
3948211 4267.1.1.0 ↗ a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like 0.53 33.0 3.83e-01 100.0% 95.0%