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ORF-93

Euk-Vir

Catopsilia_pomona_nucleopolyhedrovirus

ORF-93__YP_009255350__Catopsilia_pomona_nucleopolyhedrovirus__1850906

Identity

Accession:
YP_009255350 ↗
Protein ID:
ORF-93
Kingdom:
euk

Quality

73.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-65
PDB
D2 high residues 76-219
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17620.8 best ORF45 35.1 2.20e-08 98.6% 53.4%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oc4B03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.62 40.0 4.29e-01 93.8% 74.4%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.62 41.0 4.48e-01 93.8% 83.2%
3icsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 40.0 3.34e-01 93.8% 36.4%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 40.0 3.28e-01 93.1% 36.2%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 24.0 3.14e-01 93.8% 63.7%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.60 39.0 4.32e-01 93.8% 83.2%
1kq4A00 3.30.1360.170 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.51 46.0 4.09e-01 97.2% 99.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4393468 327.6.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Germane 0.56 44.0 4.64e-01 100.0% 92.3%
3624148 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.53 36.0 4.07e-01 79.2% 90.0%
4992317 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 35.0 3.73e-01 94.4% 78.4%
3813762 4.25.1.2 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.52 22.0 3.20e-01 91.7% 87.7%
4951973 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 19.0 2.87e-01 70.1% 81.8%
3710592 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.51 32.0 3.84e-01 93.1% 95.8%
3414008 221.1.1.51 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.51 28.0 3.21e-01 93.8% 74.0%