ORF038

Euk-Vir

Spodoptera_frugiperda_granulovirus

ORF038__YP_009121823__Spodoptera_frugiperda_granulovirus__307454

Identity

62.3 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 165-216

PDB

Domain cluster: representative

D2 medium residues 346-473

PDB

Domain cluster: representative

D3 medium residues 789-881

PDB

Domain cluster: rep: hypothetical_protein_PsunGV_gp045__YP_003422384__Pseudalatia_unipuncta_granulovirus__36355__D846-863_887-928_957-986

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4modA00	1.20.5.300	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.76	56.0	6.08e-01	76.3%	100.0%
1d2mA03	6.10.140.240	Special › Helix non-globular › Helix Hairpins ›	0.58	32.0	3.64e-01	86.0%	74.2%
2afsA00	3.40.630.10	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases	0.54	31.0	2.17e-01	82.8%	15.8%
2daeA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.53	25.0	2.73e-01	83.9%	50.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3676620	4177.1.1.0 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like	0.80	62.0	3.95e-01	80.6%	52.8%
5008465	174.1.1.95 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7144	0.53	45.0	3.91e-01	92.5%	100.0%
3655531	601.1.2.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608)	0.52	44.0	4.05e-01	93.5%	81.6%