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ORF042_RNA_polymerase_subunit_RPO7

Euk-Vir

Orf_virus

ORF042_RNA_polymerase_subunit_RPO7__NP_957819__Orf_virus__10258

Identity

Accession:
NP_957819 ↗
Protein ID:
ORF042_RNA_polymerase_subunit_RPO7
Kingdom:
euk

Quality

75.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Parapoxvirus› Orf_virus

TaxID: 10258

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05864.18 best Chordopox_RPO7 103.5 7.80e-30 100.0% 82.5%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ilvA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.71 61.0 3.74e-01 100.0% 24.2%
3zxsC02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 49.0 3.66e-01 86.5% 69.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 56.0 3.63e-01 100.0% 41.8%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.60e-01 92.3% 66.2%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 4.30e-01 92.3% 55.0%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 46.0 4.66e-01 88.5% 78.8%
1ci4A00 1.10.150.40 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF 0.64 52.0 4.57e-01 100.0% 81.8%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.64e-01 92.3% 72.1%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 48.0 5.05e-01 82.7% 100.0%
1vbgA04 1.10.189.10 Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 0.63 43.0 4.10e-01 71.2% 92.1%
2qhqA00 3.20.160.10 Alpha Beta › Alpha-Beta Barrel › pseudo Tubby roll › vpa0580 domain like 0.63 51.0 4.04e-01 96.2% 59.7%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.62 50.0 3.59e-01 100.0% 47.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.53e-01 80.8% 79.6%
2a1jB01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 45.0 4.31e-01 96.2% 88.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.65e-01 100.0% 85.7%
6pw7A01 1.10.238.180 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 39.0 3.47e-01 71.2% 49.3%
1dxlA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 45.0 3.61e-01 98.1% 94.2%
5mmjn01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 38.0 3.28e-01 73.1% 50.6%
5yhhA00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.52 39.0 2.84e-01 92.3% 34.4%
1owlA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 43.0 3.36e-01 100.0% 61.8%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2557365 101.4.1.2 ↗ alpha arrays › HTH › RPB10 › RPB10 › Chordopox_RPO7 0.83 71.0 6.72e-01 96.2% 80.3%
4393383 101.1.1.62 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.69 47.0 5.14e-01 86.5% 92.5%
5060563 101.1.1.544 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.68 45.0 4.10e-01 73.1% 51.4%
5077231 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.67 48.0 3.69e-01 76.9% 35.8%
5051712 101.1.4.90 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.67 47.0 4.71e-01 75.0% 70.9%
4664976 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 57.0 3.73e-01 100.0% 33.9%
3954433 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.67 47.0 4.91e-01 75.0% 88.9%
1738401 101.1.1.14 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.67 47.0 5.04e-01 75.0% 97.6%
3793382 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 57.0 4.68e-01 100.0% 82.0%
3786618 101.1.1.201 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.67 48.0 3.72e-01 78.8% 33.9%
None — 0.66 57.0 3.68e-01 100.0% 42.0%
4023331 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 48.0 4.73e-01 78.8% 74.5%
2330636 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.65 50.0 5.01e-01 92.3% 83.0%
4944585 101.1.2.872 ↗ alpha arrays › HTH › HTH › winged helix domain › rve 0.65 49.0 4.71e-01 84.6% 88.3%
3282225 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.65 48.0 4.24e-01 94.2% 53.8%
4011476 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 49.0 4.40e-01 84.6% 70.7%
4017824 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.64 49.0 4.39e-01 84.6% 70.7%
4280807 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.64 49.0 4.89e-01 84.6% 81.8%
3973709 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.64 50.0 4.04e-01 92.3% 43.8%
4007596 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.64 45.0 4.61e-01 88.5% 78.0%
4937493 101.1.1.25 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.64 52.0 5.01e-01 94.2% 81.7%
4413387 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.64 55.0 5.14e-01 98.1% 80.0%
4966195 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.63 54.0 4.96e-01 98.1% 74.3%
5052884 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.63 46.0 4.70e-01 94.2% 82.0%
4683276 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.63 52.0 4.28e-01 94.2% 50.5%
3969641 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.62 49.0 4.29e-01 94.2% 57.5%
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.62 49.0 4.65e-01 100.0% 72.3%
4174590 101.1.2.61 ↗ alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.61 47.0 4.43e-01 86.5% 78.5%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.61 48.0 4.24e-01 94.2% 58.7%
3908306 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.60 51.0 4.91e-01 98.1% 91.7%
3913655 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 49.0 4.37e-01 100.0% 81.2%
3971860 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.59 48.0 4.87e-01 100.0% 98.0%
4634108 2005.1.1.40 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g 0.59 48.0 2.99e-01 100.0% 17.0%
3860590 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.58 47.0 4.82e-01 92.3% 98.0%
1594930 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.57 46.0 4.68e-01 92.3% 100.0%
3344127 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 44.0 4.45e-01 90.4% 100.0%
3480546 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.55 40.0 2.59e-01 98.1% 16.2%