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ORF047

Euk-Vir

Spodoptera_frugiperda_granulovirus

ORF047__YP_009121832__Spodoptera_frugiperda_granulovirus__307454

Identity

Accession:: YP_009121832 ↗
Protein ID:: ORF047
Kingdom:: euk

Quality

84.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-124

PDB

Domain cluster: rep: hypothetical_protein__YP_009249888__Mocis_latipes_granulovirus__2072024__D4-128

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1uujA00	1.20.960.30	Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A ›	0.69	29.0	3.74e-01	83.6%	65.8%
1e3dB00	1.10.645.10	Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B	0.63	44.0	2.91e-01	72.1%	80.1%
3ebbA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.62	37.0	2.90e-01	100.0%	27.3%
1hs7A00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.59	40.0	4.45e-01	99.2%	88.7%
1yozA00	1.10.3200.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like	0.58	40.0	4.16e-01	95.9%	76.1%
1yhuB00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.58	37.0	3.56e-01	82.8%	54.9%
4hwhE00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.56	36.0	4.12e-01	97.5%	90.9%
4i9oA00	1.10.246.20	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain	0.55	29.0	3.67e-01	89.3%	83.3%
2rldA00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.53	34.0	3.53e-01	100.0%	68.4%
4a18Q01	1.10.10.1760	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36	0.53	27.0	3.51e-01	81.1%	87.0%
3zc4A01	1.20.120.1610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.53	35.0	3.99e-01	88.5%	93.3%
6at7B03	1.10.274.20	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3	0.52	38.0	3.99e-01	74.6%	100.0%
2yxhA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.52	30.0	3.16e-01	91.0%	61.1%
3a7mA01	1.20.58.380	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit.	0.52	34.0	3.54e-01	98.4%	72.7%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3623556	109.46.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH	0.69	39.0	3.32e-01	83.6%	35.3%
3317778	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.54	44.0	3.65e-01	88.5%	86.5%
3918141	633.23.1.0 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin	0.53	36.0	3.60e-01	100.0%	66.2%
3332286	3684.1.1.2 ↗	alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1	0.53	41.0	3.37e-01	83.6%	65.8%
4976599	5050.1.1.60 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_3	0.53	44.0	3.70e-01	91.0%	95.2%
3628737	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.52	30.0	2.42e-01	86.1%	29.4%
3608532	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.51	38.0	3.88e-01	98.4%	78.0%
3503989	162.1.1.1 ↗	alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD	0.51	34.0	3.80e-01	74.6%	87.4%
5079313	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.51	45.0	3.83e-01	95.9%	91.3%
5042470	604.5.1.1 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div	0.51	38.0	3.25e-01	100.0%	47.3%
3272245	4121.1.1.1 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA	0.50	41.0	3.16e-01	99.2%	39.3%

D2 high residues 129-262

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ga4A01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.59	24.0	3.27e-01	94.8%	73.1%
1bvp101	1.10.250.10	Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 1 › Bluetongue Virus 10, subunit 1, domain 1	0.55	31.0	3.23e-01	82.8%	59.2%
2remB00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.55	37.0	3.31e-01	90.3%	48.7%
3qf3D00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.54	36.0	3.76e-01	99.3%	71.9%
1jr3C02	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.52	39.0	4.13e-01	78.4%	95.1%
1xvhB00	1.20.120.1850	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules)	0.50	27.0	2.85e-01	100.0%	55.9%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3070398	3758.2.1.1 ↗	alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB	0.56	30.0	2.45e-01	88.1%	27.1%
5052572	5079.1.1.1 ↗	alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE	0.54	38.0	3.61e-01	71.6%	99.4%
3721280	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	42.0	3.87e-01	82.8%	90.9%
5056040	5052.1.1.0 ↗	alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein	0.53	46.0	3.73e-01	99.3%	96.5%
3786647	592.6.1.1 ↗	alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug	0.53	30.0	3.72e-01	73.1%	91.3%
3785931	195.1.1.3 ↗	alpha complex topology › NusB-like › NusB-like › NusB-like › NSUN5_N	0.52	34.0	3.47e-01	80.6%	66.9%
3301471	5067.1.1.17 ↗	alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › AtTam38	0.51	38.0	4.16e-01	100.0%	94.5%
3308892	3273.1.1.9 ↗	alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › AtTam38	0.51	38.0	3.85e-01	100.0%	77.0%
3943905	1075.4.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane	0.51	37.0	2.84e-01	76.1%	94.2%