ORF056

Euk-Vir

Spodoptera_frugiperda_granulovirus

ORF056__YP_009121841__Spodoptera_frugiperda_granulovirus__307454

Identity

77.6 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

View cluster (22 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-94

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ajiB02	2.30.30.60	Mainly Beta › Roll › SH3 type barrels. ›	0.61	33.0	3.75e-01	98.6%	72.0%
1hxdA03	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.59	33.0	3.98e-01	98.6%	90.7%
3pnnA00	3.90.550.10	Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	0.58	36.0	2.37e-01	89.0%	15.3%
2ra2B00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.54	34.0	3.79e-01	82.2%	81.0%
2ldmA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.54	34.0	3.83e-01	86.3%	86.8%
2p4oA01	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.53	44.0	3.08e-01	100.0%	90.4%
4py5A01	3.30.310.10	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein	0.50	31.0	3.13e-01	83.6%	61.1%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4139090	4.1.1.364 ↗	beta barrels › SH3 › SH3 › SH3 › GatD_N	0.61	35.0	3.95e-01	98.6%	74.5%
5029405	4.17.1.1 ↗	beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N	0.60	35.0	3.86e-01	98.6%	74.5%
3256431	4.1.1.360 ↗	beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2	0.57	35.0	3.45e-01	98.6%	55.0%
3510676	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	34.0	3.19e-01	87.7%	46.3%
3884178	4184.1.1.0 ↗	beta barrels › MFPT repeat › MFPT repeat › MFPT repeat	0.53	33.0	3.36e-01	100.0%	60.0%
4932434	4.1.1.364 ↗	beta barrels › SH3 › SH3 › SH3 › GatD_N	0.52	35.0	3.59e-01	90.4%	72.9%
3556601	4.1.1.304 ↗	beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O	0.50	33.0	3.50e-01	87.7%	76.9%

D2 high residues 101-184

PDB

Domain cluster: rep: unknown_similar_to_AMEV109__YP_008003671__Mythimna_separata_entomopoxvirus_L__1293572__D112-193

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2digA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.56	33.0	3.55e-01	92.9%	69.1%
2xzhA00	2.130.10.110	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain	0.50	43.0	2.87e-01	96.4%	84.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1289661	4.1.1.101 ↗	beta barrels › SH3 › SH3 › SH3 › Tudor_2	0.58	32.0	3.49e-01	88.1%	65.7%
3870532	5.1.3.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed	0.55	45.0	3.13e-01	91.7%	87.3%
3472726	4.1.1.65 ↗	beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor	0.54	38.0	3.44e-01	76.2%	84.8%
3920026	4.1.1.101 ↗	beta barrels › SH3 › SH3 › SH3 › Tudor_2	0.52	38.0	2.89e-01	78.6%	31.0%
3993250	4.1.1.333 ↗	beta barrels › SH3 › SH3 › SH3 › PF29330	0.51	29.0	3.34e-01	88.1%	80.0%
3898952	4.1.1.1 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_1	0.51	32.0	3.36e-01	88.1%	70.7%

D3 high residues 190-216_255-412

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xgrA00	3.40.570.10	Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A	0.59	51.0	5.00e-01	89.7%	89.8%
3daaA01	3.30.470.10	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain	0.58	36.0	4.42e-01	78.9%	96.6%
4o3vA00	3.10.450.230	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein	0.58	34.0	3.92e-01	100.0%	77.5%
3owvB00	3.40.570.10	Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A	0.57	52.0	4.89e-01	97.8%	84.4%
3bnvD00	3.10.129.10	Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase	0.53	35.0	3.89e-01	71.9%	84.6%
3b7cA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	31.0	3.68e-01	98.4%	85.8%
2imjD01	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.53	30.0	3.36e-01	100.0%	69.7%
2uvaG09	2.40.128.700	Mainly Beta › Beta Barrel › Lipocalin ›	0.52	29.0	3.48e-01	100.0%	81.9%
1tuhA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.51	31.0	3.53e-01	100.0%	81.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3800349	708.1.1.0 ↗	beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain	0.60	32.0	4.15e-01	92.4%	90.5%
3606839	243.1.1.0 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like	0.58	30.0	3.52e-01	93.0%	68.5%
3284315	243.1.1.28 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440	0.55	32.0	3.83e-01	73.0%	84.0%
3289451	243.1.1.63 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6841	0.55	33.0	3.75e-01	100.0%	78.6%
4280513	222.2.1.1 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Insertion domain in thioesterase › Insertion domain in thioesterase › FAS1_thioest_ins	0.54	28.0	3.51e-01	98.4%	81.8%
3724634	243.1.1.63 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6841	0.53	33.0	3.75e-01	100.0%	80.7%
3266884	708.1.1.0 ↗	beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain	0.53	29.0	2.99e-01	95.1%	51.1%
4944090	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.51	22.0	2.76e-01	75.1%	62.7%
4560358	222.1.1.17 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N	0.50	34.0	3.89e-01	70.3%	91.4%