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ORF064_mRNA_capping_enzyme_large_subunit

Euk-Vir

Orf_virus

ORF064_mRNA_capping_enzyme_large_subunit__NP_957841__Orf_virus__10258

Identity

Accession:
NP_957841 ↗
Protein ID:
ORF064_mRNA_capping_enzyme_large_subunit
Kingdom:
euk

Quality

82.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Parapoxvirus› Orf_virus

TaxID: 10258

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 234-390
PDB
Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21004.4 best MCEL_GT_NTPase 107.0 6.10e-31 65.0% 86.7%
D2 high residues 396-523
PDB
Domain cluster: rep: putative_D1R_protein__YP_010085774__Orthopoxvirus_Abatino__2478919__D399-522
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21005.5 best OB_MCEL_GT 195.5 5.60e-58 100.0% 92.0%
D3 high residues 584-709_761-777
PDB
Domain cluster: rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03291.23 best mRNA_G-N7_MeTrfase 41.7 1.10e-10 97.2% 38.1%
D4 medium residues 1-56_144-160_184-224
PDB
Domain cluster: rep: hypothetical_protein_OtV5_164__YP_001648262__Ostreococcus_tauri_virus_OtV5__1785753__D20-71_137-154_167-201
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10640.15 best MCEL_TPase 28.9 1.00e-06 35.1% 16.7%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7pjcA02 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.68 48.0 4.63e-01 73.7% 96.9%
1nrjA00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 34.0 3.16e-01 90.4% 38.1%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 45.0 4.01e-01 73.7% 92.2%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.64 48.0 4.14e-01 78.9% 92.5%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 33.0 3.20e-01 93.0% 43.2%
1p5dX04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.62 47.0 5.10e-01 81.6% 96.8%
1d1jB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 34.0 3.22e-01 93.0% 44.1%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.61 45.0 4.82e-01 86.0% 91.7%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 32.0 3.20e-01 94.7% 48.7%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 39.0 4.19e-01 95.6% 79.4%
6fh1B01 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.59 51.0 4.12e-01 97.4% 97.9%
2wmcA00 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.59 41.0 3.59e-01 76.3% 47.1%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 41.0 3.66e-01 73.7% 81.7%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.58 41.0 3.58e-01 71.9% 76.3%
6frlA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 38.0 2.51e-01 77.2% 15.3%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 2.61e-01 80.7% 15.9%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 2.58e-01 80.7% 15.3%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 41.0 3.92e-01 73.7% 95.5%
1p50A02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.57 48.0 3.75e-01 93.0% 93.1%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 45.0 3.67e-01 84.2% 87.3%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 41.0 3.91e-01 76.3% 95.7%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 45.0 3.94e-01 86.0% 92.1%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 43.0 4.19e-01 95.6% 72.3%
1mzpA01 3.30.190.20 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain 0.56 47.0 4.62e-01 96.5% 84.9%
3i6dA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.56 40.0 3.42e-01 75.4% 49.0%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 3.54e-01 72.8% 84.5%
4j31A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 2.79e-01 75.4% 25.1%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 40.0 4.28e-01 81.6% 92.7%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 3.85e-01 79.8% 99.3%
7ewsB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.53 47.0 3.66e-01 99.1% 97.6%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 3.58e-01 76.3% 83.4%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.53 30.0 3.25e-01 71.9% 65.3%
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 38.0 4.12e-01 82.5% 96.8%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 43.0 4.12e-01 93.0% 79.7%
3i3lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 2.59e-01 78.1% 21.4%
1x31C01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.51 40.0 4.18e-01 93.0% 93.3%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 42.0 3.25e-01 90.4% 66.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046979 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 32.0 3.26e-01 92.1% 47.3%
5045959 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 32.0 3.25e-01 93.0% 48.2%
3701181 331.18.1.0 ↗ a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.63 45.0 3.62e-01 75.4% 50.9%
3445390 305.2.1.0 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.62 54.0 5.47e-01 95.6% 94.8%
5054097 305.1.1.10 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › PF27806 0.62 41.0 4.61e-01 87.7% 91.8%
2413833 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.59 41.0 3.97e-01 71.9% 74.2%
3973141 331.2.1.0 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.58 41.0 4.50e-01 74.6% 100.0%
3714597 331.18.1.0 ↗ a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.57 41.0 3.82e-01 76.3% 66.7%
4112955 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.54 48.0 3.82e-01 100.0% 74.6%
3913066 223.2.1.36 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.53 38.0 3.25e-01 73.7% 89.6%
3487629 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 39.0 3.67e-01 76.3% 85.9%
D5 medium residues 57-143_161-183
PDB
Domain cluster: rep: mRNA_capping_enzyme_large_subunit__YP_010085378__Eastern_grey_kangaroopox_virus__2042482__D72-123_138-160_176-203
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF10640.15 best MCEL_TPase 130.1 1.00e-37 80.0% 43.4%
PF10640.15 MCEL_TPase 28.4 1.50e-06 21.8% 11.6%
D6 medium residues 710-760
PDB
Domain cluster: rep: mRNA_capping_enzyme_large_subunit__YP_784299__Nile_crocodilepox_virus__1285600__D719-769