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ORF1-ORF2_fusion_protein
Euk-VirMaize-associated_totivirus_1
ORF1-ORF2_fusion_protein__YP_009170670__Maize-associated_totivirus_1__1729670
Identity
- Accession:
- YP_009170670 ↗
- Protein ID:
- ORF1-ORF2_fusion_protein
- Kingdom:
- euk
Quality
65.3
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Chrymotiviricetes›
Ghabrivirales›
Orthototiviridae›
Totivirus›
Maize-associated_totivirus_1
TaxID: 1729670
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 530-583
Domain cluster:
representative
D2
medium
residues 713-740_835-905_941-975
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 25.8 | 6.90e-06 | 57.5% | 13.3% |
| PF02123.22 | RdRP_4 | 24.1 | 2.30e-05 | 26.9% | 7.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l6aA01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 33.0 | 2.90e-01 | 78.4% | 40.0% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.55 | 22.0 | 2.75e-01 | 86.6% | 57.6% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 35.0 | 3.26e-01 | 80.6% | 51.1% |
| 2fzlA02 | 6.10.140.1180 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 24.0 | 3.39e-01 | 85.8% | 93.5% |
| 2ggfA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 30.0 | 3.07e-01 | 76.1% | 55.5% |