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ORF110
Euk-VirSpodoptera_eridania_nucleopolyhedrovirus
ORF110__YP_010087111__Spodoptera_eridania_nucleopolyhedrovirus__2315721
Identity
- Accession:
- YP_010087111 ↗
- Protein ID:
- ORF110
- Kingdom:
- euk
Quality
86.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_eridania_nucleopolyhedrovirus
TaxID: 2315721
Cluster
View cluster (41 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-122
Domain cluster:
rep: hypothetical_protein__YP_009182318__Diatraea_saccharalis_granulovirus__1675862__D28-120
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05883.18 best | Baculo_RING | 101.4 | 6.00e-29 | 100.0% | 71.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 40.0 | 3.45e-01 | 79.4% | 70.1% |
| 2levA00 | 4.10.430.10 | Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain | 0.52 | 25.0 | 3.04e-01 | 84.5% | 71.9% |
| 5je6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 37.0 | 2.90e-01 | 79.4% | 73.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396437 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.75 | 46.0 | 5.03e-01 | 85.6% | 75.0% |
| 4011007 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.73 | 44.0 | 4.25e-01 | 84.5% | 54.5% |
| 4024500 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.72 | 45.0 | 4.53e-01 | 87.6% | 62.0% |
| 3818416 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 47.0 | 5.13e-01 | 71.1% | 81.2% |
| 3250122 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 49.0 | 4.88e-01 | 84.5% | 69.0% |
| 3277696 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 45.0 | 5.17e-01 | 85.6% | 86.3% |
| 3467156 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 45.0 | 4.38e-01 | 76.3% | 87.3% |
| 3579674 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.61 | 47.0 | 4.74e-01 | 99.0% | 82.0% |
| 4947741 | 821.1.1.17 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF27096 | 0.51 | 36.0 | 3.83e-01 | 78.4% | 83.5% |
| 5052958 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.50 | 32.0 | 3.52e-01 | 79.4% | 78.8% |
| 4929079 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.50 | 33.0 | 3.35e-01 | 82.5% | 68.1% |