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ORF110_protein

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

ORF110_protein__YP_009552670__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

Accession:: YP_009552670 ↗
Protein ID:: ORF110_protein
Kingdom:: euk

Quality

80.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

Cluster

View cluster (40 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 255-397

PDB

Domain cluster: rep: hypothetical_protein__YP_002300606__Adoxophyes_orana_nucleopolyhedrovirus__542343__D251-376

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07134.18 best	AcMNPV_Orf18	44.9	1.30e-11	56.6%	25.9%

D2 medium residues 1-35_125-182_195-230

PDB

Domain cluster: rep: ac18-like_protein__YP_009133223__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929__D1-43_149-216_273-344

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07134.18 best	AcMNPV_Orf18	48.7	8.70e-13	73.6%	30.2%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3jb9F00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.63	32.0	3.91e-01	75.2%	75.6%
4f7uF00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.61	31.0	3.96e-01	76.7%	84.9%
1d3bC00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.61	31.0	4.00e-01	76.7%	87.3%
6v4xC01	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.60	33.0	3.66e-01	73.6%	67.0%
3jb9H00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.60	32.0	3.94e-01	76.0%	85.5%
1ljoA00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.56	30.0	3.65e-01	76.7%	84.0%
2hldH01	2.60.15.10	Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal	0.51	28.0	3.33e-01	73.6%	79.8%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4015654	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	32.0	4.11e-01	76.0%	87.1%
4884271	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.63	32.0	4.08e-01	74.4%	84.7%
3506156	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.63	31.0	3.99e-01	76.7%	80.0%
4876572	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.63	32.0	3.81e-01	77.5%	70.5%
4015537	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.62	31.0	3.82e-01	76.7%	75.6%
3715818	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.62	32.0	3.66e-01	76.7%	65.3%
3598657	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.62	32.0	3.62e-01	76.7%	63.0%
3396989	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.60	33.0	3.76e-01	72.9%	70.0%
4029204	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.60	31.0	3.69e-01	77.5%	72.9%
5000810	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.59	31.0	3.63e-01	76.7%	72.9%
3592930	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.59	31.0	3.62e-01	71.3%	69.5%
3890091	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.59	33.0	3.96e-01	76.7%	85.0%
4876565	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.58	32.0	3.72e-01	72.9%	74.4%
2391272	4.1.1.19 ↗	beta barrels › SH3 › SH3 › SH3 › LSM	0.57	30.0	3.44e-01	78.3%	66.7%
5075579	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	30.0	3.56e-01	76.7%	77.5%
4319216	3523.1.1.2 ↗	beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N	0.56	39.0	3.45e-01	94.6%	48.4%
4244588	3523.1.1.2 ↗	beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N	0.55	37.0	3.32e-01	84.5%	49.7%
4944961	4121.1.1.19 ↗	a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF27230	0.52	42.0	3.11e-01	88.4%	79.2%

D3 medium residues 36-124_183-194_231-254

PDB

Domain cluster: rep: hypothetical_protein__YP_009666488__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D1-70_170-200

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07134.18 best	AcMNPV_Orf18	43.6	3.10e-11	91.2%	28.1%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ewfA02	1.20.1270.310	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.60	27.0	3.30e-01	71.2%	64.2%
4o8sA01	3.10.450.620	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain	0.59	52.0	5.25e-01	100.0%	96.0%
1ou5A01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.52	46.0	4.44e-01	100.0%	87.1%
3hdoA01	3.90.1150.10	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1	0.52	30.0	3.02e-01	80.8%	52.3%
4v1gA00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.50	29.0	3.36e-01	70.4%	81.2%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2092693	316.1.1.21 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit	0.65	60.0	5.29e-01	100.0%	69.5%
4017156	316.1.1.0 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase	0.62	56.0	4.41e-01	100.0%	61.9%
3508699	316.1.1.0 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase	0.60	56.0	5.16e-01	99.2%	89.0%
3238464	316.1.1.49 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › W02B3_4_N	0.54	40.0	4.14e-01	96.8%	83.5%