←Back to structures

ORF11

Euk-Vir

Alcelaphine_gammaherpesvirus_1

ORF11__NP_065515__Alcelaphine_gammaherpesvirus_1__35252

Identity

Accession:
NP_065515 ↗
Protein ID:
ORF11
Kingdom:
euk

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Macavirus› Alcelaphine_gammaherpesvirus_1

TaxID: 35252

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-138
PDB
Domain cluster: rep: hypothetical_protein_RHVP.11__YP_004207851__Cricetid_gammaherpesvirus_2__1605972__D11-122
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 148.3 4.00e-43 98.3% 31.2%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bsyA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.79 65.0 6.01e-01 97.5% 69.4%
2z1kA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 45.0 5.17e-01 96.6% 89.4%
3vgfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 37.0 4.75e-01 95.0% 100.0%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 25.0 3.37e-01 98.3% 65.2%
2bsyA02 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.64 50.0 5.29e-01 97.5% 97.1%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 42.0 4.75e-01 91.6% 92.0%
3t64A01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.62 55.0 5.30e-01 97.5% 91.3%
3h6xB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.61 55.0 5.35e-01 98.3% 93.8%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 40.0 4.46e-01 98.3% 88.2%
1fnfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 39.0 4.31e-01 88.2% 84.0%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 4.62e-01 86.6% 99.3%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.59 46.0 4.23e-01 93.3% 63.7%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 31.0 3.62e-01 95.8% 72.3%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 3.90e-01 88.2% 86.9%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 49.0 5.09e-01 100.0% 96.5%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 40.0 4.54e-01 86.6% 100.0%
3km3B00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.57 51.0 4.67e-01 97.5% 84.6%
4pqqA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 48.0 4.41e-01 97.5% 69.9%
1n26A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.16e-01 86.6% 81.7%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.04e-01 88.2% 75.0%
3og6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 4.14e-01 86.6% 82.8%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.43e-01 89.1% 99.3%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 4.43e-01 97.5% 76.5%
1qhdA01 2.60.120.170 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 4.40e-01 97.5% 98.8%
4djmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 3.93e-01 88.2% 88.7%
6gh3A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.56 50.0 3.68e-01 100.0% 56.8%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 4.11e-01 91.6% 87.6%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.55 49.0 4.68e-01 96.6% 100.0%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 4.15e-01 97.5% 96.2%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.45e-01 98.3% 89.9%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 49.0 3.68e-01 99.2% 98.0%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 4.29e-01 87.4% 98.5%
2jllA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 3.94e-01 87.4% 82.7%
1yjdC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.32e-01 87.4% 85.6%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 36.0 3.45e-01 86.6% 58.7%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 36.0 3.41e-01 85.7% 58.0%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 47.0 4.30e-01 97.5% 73.0%
2erjB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 4.06e-01 86.6% 85.6%
7dd9A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 42.0 3.30e-01 84.0% 92.6%
7bi2A02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 38.0 3.67e-01 75.6% 65.9%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 4.20e-01 95.8% 87.2%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 45.0 4.41e-01 93.3% 85.5%
3s2cJ01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 46.0 4.38e-01 95.0% 87.9%
4fcaA01 2.60.120.1250 Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 0.52 39.0 4.05e-01 95.0% 85.3%
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.52 47.0 3.58e-01 99.2% 66.8%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 4.39e-01 95.0% 89.2%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.05e-01 95.8% 85.5%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 35.0 3.28e-01 85.7% 55.4%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 46.0 3.51e-01 98.3% 48.0%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 41.0 3.89e-01 96.6% 72.1%
1k1yB02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 45.0 3.54e-01 96.6% 53.6%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.51 44.0 4.06e-01 96.6% 84.9%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.51 44.0 3.34e-01 97.5% 94.4%
4ekjA01 2.60.40.1500 Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 0.51 46.0 4.20e-01 99.2% 87.7%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 38.0 3.67e-01 90.8% 69.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
367299 70.2.1.0 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like 0.80 64.0 6.65e-01 98.3% 89.3%
1241359 12.1.1.58 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Neopullulanase-like_C 0.69 44.0 5.23e-01 96.6% 96.2%
1974 12.1.1.7 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C 0.69 37.0 4.69e-01 95.0% 92.5%
4989636 12.1.1.7 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C 0.67 37.0 4.76e-01 95.8% 98.5%
5038684 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 44.0 4.57e-01 94.1% 74.5%
3456576 10.32.1.307 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SAC9_C, SAC9_GBDL_1st 0.62 47.0 3.39e-01 95.0% 26.6%
3810458 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 36.0 3.98e-01 98.3% 71.6%
5036166 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 43.0 4.90e-01 84.0% 100.0%
3666577 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 36.0 3.91e-01 98.3% 69.7%
4281177 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 44.0 4.95e-01 94.1% 100.0%
4266103 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.61 43.0 4.23e-01 96.6% 67.7%
5053195 10.12.1.98 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.60 45.0 4.43e-01 96.6% 73.6%
4887934 10.3.1.8 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › Bc2l-C_N 0.60 49.0 4.68e-01 87.4% 99.3%
4025604 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.60 40.0 4.19e-01 93.3% 74.5%
3604149 70.2.1.6 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DUF22 0.58 42.0 4.52e-01 87.4% 92.0%
4944535 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 50.0 3.81e-01 97.5% 57.2%
1516 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 39.0 4.16e-01 86.6% 81.7%
3209949 11.2.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 0.56 39.0 3.14e-01 81.5% 36.2%
3576175 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 37.0 4.34e-01 87.4% 100.0%
3930491 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.56 41.0 4.26e-01 94.1% 83.6%
2453076 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.56 41.0 4.25e-01 96.6% 85.0%
5007276 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 47.0 4.52e-01 95.0% 79.3%
4890817 10.32.1.12 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.56 48.0 4.62e-01 94.1% 84.3%
2843027 11.1.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M 0.56 41.0 4.03e-01 97.5% 71.9%
3506316 10.32.1.28 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.55 48.0 4.28e-01 96.6% 72.6%
3486123 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 39.0 4.17e-01 88.2% 84.8%
3623050 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.55 40.0 4.13e-01 95.0% 80.0%
3735894 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 42.0 3.98e-01 92.4% 66.7%
4002700 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.55 40.0 4.11e-01 95.0% 82.7%
3932352 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.54 40.0 4.17e-01 95.0% 86.7%
134273 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.54 44.0 4.05e-01 98.3% 65.8%
3287504 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 37.0 4.00e-01 93.3% 85.0%
3322850 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.54 47.0 3.66e-01 97.5% 96.0%
3526189 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.54 43.0 4.02e-01 97.5% 68.7%
3546318 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 41.0 3.77e-01 100.0% 60.6%
3252995 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.54 47.0 3.87e-01 97.5% 72.0%
3249088 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.54 47.0 3.93e-01 100.0% 70.5%
3878667 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 37.0 3.80e-01 87.4% 74.8%
3895339 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 4.04e-01 97.5% 80.9%
5005735 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 4.12e-01 85.7% 97.8%
3411485 11.2.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 0.52 40.0 3.42e-01 80.7% 54.9%
3494637 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.52 40.0 3.77e-01 91.6% 66.9%
3396396 10.32.1.216 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.52 44.0 3.71e-01 95.8% 75.8%
3252445 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.52 36.0 2.89e-01 87.4% 34.4%
3619410 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.51 41.0 3.63e-01 85.7% 94.2%
3251123 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 38.0 4.07e-01 88.2% 93.0%
4216241 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.51 38.0 3.11e-01 79.0% 53.9%
5082586 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 4.08e-01 96.6% 85.0%
4944748 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.93e-01 97.5% 80.8%
4667643 240.2.1.0 ↗ a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit 0.51 29.0 2.95e-01 90.8% 53.3%
3287782 10.12.1.22 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › KduI 0.50 44.0 3.33e-01 97.5% 43.4%
3496218 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 43.0 3.61e-01 96.6% 63.3%
168281 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.50 38.0 3.67e-01 90.8% 69.6%
D2 high residues 142-265
PDB
Domain cluster: rep: hypothetical_protein__YP_009551822__Rhinolophus_gammaherpesvirus_1__2054179__D140-277
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 137.1 9.70e-40 100.0% 34.9%
D3 high residues 272-359
PDB
Domain cluster: rep: GP72__YP_007417837__Caviid_betaherpesvirus_2__33706__D239-337
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 113.9 1.10e-32 100.0% 23.5%