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ORF1
Euk-VirCallitrichine_gammaherpesvirus_3
ORF1__NP_733853__Callitrichine_gammaherpesvirus_3__106331
Identity
- Accession:
- NP_733853 ↗
- Protein ID:
- ORF1
- Kingdom:
- euk
Quality
87.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Lymphocryptovirus›
callitrichine_gammaherpesvirus_3
TaxID: 106331
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-121
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06861.16 best | BALF1 | 139.8 | 1.20e-40 | 100.0% | 42.4% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.83 | 77.0 | 6.16e-01 | 100.0% | 56.2% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.83 | 75.0 | 5.94e-01 | 100.0% | 50.3% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.82 | 74.0 | 6.08e-01 | 100.0% | 55.9% |
| 4uf1A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.81 | 71.0 | 5.84e-01 | 100.0% | 54.8% |
| 3qbrX00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.77 | 69.0 | 5.44e-01 | 100.0% | 51.6% |
| 4u2vA02 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.75 | 67.0 | 6.68e-01 | 97.4% | 93.8% |
| 2aboA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.74 | 61.0 | 5.20e-01 | 100.0% | 55.0% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 51.0 | 4.55e-01 | 84.6% | 62.3% |
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.65 | 56.0 | 4.66e-01 | 100.0% | 68.5% |
| 2qvwB05 | 1.10.1740.150 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.64 | 34.0 | 3.44e-01 | 100.0% | 51.3% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.63 | 54.0 | 4.92e-01 | 98.7% | 76.9% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 49.0 | 4.06e-01 | 89.7% | 99.3% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.61 | 47.0 | 4.07e-01 | 84.6% | 88.4% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.60 | 47.0 | 4.24e-01 | 87.2% | 66.1% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.01e-01 | 79.5% | 69.4% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 43.0 | 4.24e-01 | 75.6% | 97.6% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 49.0 | 4.09e-01 | 93.6% | 100.0% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.59 | 45.0 | 2.86e-01 | 83.3% | 55.5% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 42.0 | 3.86e-01 | 75.6% | 87.3% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.58 | 42.0 | 3.84e-01 | 76.9% | 57.1% |
| 2n1rA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.58 | 49.0 | 4.22e-01 | 98.7% | 59.0% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 40.0 | 3.64e-01 | 74.4% | 78.2% |
| 3tu3B03 | 1.20.1050.100 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 40.0 | 3.19e-01 | 76.9% | 34.1% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 40.0 | 3.66e-01 | 75.6% | 78.5% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 38.0 | 3.58e-01 | 70.5% | 85.7% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.55 | 41.0 | 3.60e-01 | 79.5% | 61.2% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.24e-01 | 70.5% | 75.4% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.55 | 39.0 | 3.40e-01 | 74.4% | 79.0% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.55 | 40.0 | 3.31e-01 | 79.5% | 63.4% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.54 | 42.0 | 4.00e-01 | 84.6% | 93.5% |
| 1a5tA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.53 | 38.0 | 3.35e-01 | 75.6% | 60.3% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 3.48e-01 | 78.2% | 82.9% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.51 | 37.0 | 3.13e-01 | 74.4% | 54.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2464246 | 5000.3.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2 | 0.87 | 82.0 | 6.41e-01 | 100.0% | 53.4% |
| 3554813 | 5000.3.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2 | 0.83 | 76.0 | 5.74e-01 | 100.0% | 46.3% |
| 3986989 | 5054.1.1.68 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › AI-2E_transport | 0.69 | 51.0 | 3.97e-01 | 78.2% | 47.1% |
| 4998411 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.67 | 48.0 | 4.94e-01 | 75.6% | 85.3% |
| 5001242 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.66 | 52.0 | 4.24e-01 | 84.6% | 54.5% |
| 5044956 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.66 | 57.0 | 4.84e-01 | 96.2% | 85.4% |
| 4946854 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.63 | 48.0 | 4.13e-01 | 83.3% | 79.2% |
| 4283859 | 109.4.1.1161 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_MEC1_N | 0.63 | 45.0 | 2.93e-01 | 75.6% | 32.4% |
| 4287075 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.63 | 51.0 | 4.90e-01 | 89.7% | 88.9% |
| 4124450 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.62 | 45.0 | 4.77e-01 | 82.1% | 89.7% |
| 3506491 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.61 | 52.0 | 4.86e-01 | 98.7% | 88.0% |
| 3278832 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.61 | 45.0 | 3.81e-01 | 79.5% | 58.5% |
| 5000432 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.61 | 51.0 | 4.87e-01 | 93.6% | 88.9% |
| 3367150 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.60 | 43.0 | 4.12e-01 | 78.2% | 75.8% |
| 3611276 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.59 | 45.0 | 4.19e-01 | 82.1% | 82.0% |
| 3925681 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.59 | 49.0 | 4.81e-01 | 100.0% | 100.0% |
| 3562783 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.59 | 44.0 | 3.87e-01 | 80.8% | 54.6% |
| 3382499 | 3755.3.1.308 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF629 | 0.59 | 51.0 | 3.94e-01 | 97.4% | 46.3% |
| 5026895 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.58 | 46.0 | 4.52e-01 | 87.2% | 98.8% |
| 3705589 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.58 | 43.0 | 4.07e-01 | 82.1% | 65.0% |
| 3941249 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 41.0 | 3.79e-01 | 74.4% | 81.0% |
| 3402306 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.56 | 43.0 | 3.78e-01 | 83.3% | 65.0% |
| 3380671 | 5050.1.1.8 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FPN1 | 0.56 | 48.0 | 3.89e-01 | 98.7% | 58.1% |
| 4116357 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 47.0 | 3.64e-01 | 100.0% | 50.0% |
| 3611824 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.54 | 40.0 | 4.21e-01 | 82.1% | 98.6% |
| 4992431 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.54 | 43.0 | 3.72e-01 | 87.2% | 60.0% |
| 3648998 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.54 | 39.0 | 3.80e-01 | 78.2% | 75.6% |
| 3628945 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 44.0 | 3.35e-01 | 93.6% | 73.7% |
| 5066065 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.53 | 42.0 | 3.61e-01 | 87.2% | 61.6% |
| 3666229 | 109.4.1.603 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF1_subA | 0.50 | 38.0 | 2.40e-01 | 80.8% | 22.6% |
D2
medium
residues 122-173
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06861.16 best | BALF1 | 93.1 | 2.50e-26 | 100.0% | 28.3% |