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ORF1
Euk-VirRodent_Torque_teno_virus_2
ORF1__YP_009112881__Rodent_Torque_teno_virus_2__1514665
Identity
- Accession:
- YP_009112881 ↗
- Protein ID:
- ORF1
- Kingdom:
- euk
Quality
70.2
mean pLDDT
Taxonomy
Shotokuvirae›
Commensaviricota›
Cardeaviricetes›
Sanitavirales›
Anelloviridae›
Rodent_Torque_teno_virus_2
TaxID: 1514665
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 59-227_403-414
Domain cluster:
rep: capsid__YP_009551495__Molossus_molossus_circovirus_3__1959844__D38-102_119-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02956.21 best | TT_ORF1 | 115.4 | 4.30e-33 | 94.5% | 32.8% |
D2
high
residues 239-387
Domain cluster:
rep: putative_ORF1__YP_009551913__Rodent_Torque_teno_virus_4__2054611__D201-338
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5adxJ01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.54 | 32.0 | 3.93e-01 | 100.0% | 93.5% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.54 | 37.0 | 3.92e-01 | 100.0% | 77.2% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 32.0 | 3.61e-01 | 100.0% | 81.9% |
| 2cocA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 31.0 | 3.65e-01 | 98.0% | 91.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4069753 | 295.1.1.2 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA | 0.54 | 37.0 | 3.87e-01 | 100.0% | 77.0% |
| 4674129 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 32.0 | 3.67e-01 | 100.0% | 82.9% |
| 3254541 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 33.0 | 3.81e-01 | 100.0% | 85.5% |
| 3704544 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.52 | 31.0 | 3.15e-01 | 100.0% | 59.3% |
| 3916003 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.51 | 31.0 | 3.48e-01 | 100.0% | 77.4% |
| 3997533 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 33.0 | 3.73e-01 | 100.0% | 84.3% |
| 3233071 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 31.0 | 3.64e-01 | 100.0% | 85.7% |
| 3595300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 31.0 | 3.73e-01 | 100.0% | 94.7% |
| 3475602 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 36.0 | 4.01e-01 | 100.0% | 93.9% |
| 3266727 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 31.0 | 3.52e-01 | 100.0% | 80.0% |
| 3853402 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 33.0 | 3.61e-01 | 100.0% | 79.2% |