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ORF1

Euk-Vir

Simian_torque_teno_virus_31

ORF1__YP_009126942__Simian_torque_teno_virus_31__1619219

Identity

Accession:
YP_009126942 ↗
Protein ID:
ORF1
Kingdom:
euk

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 85-262_562-584
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02956.21 best TT_ORF1 249.4 1.00e-73 91.0% 34.1%
D2 medium residues 263-281_421-559
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02956.21 best TT_ORF1 137.7 7.50e-40 99.4% 26.9%
D3 medium residues 282-420
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jcpB01 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.57 30.0 2.71e-01 95.0% 34.4%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 27.0 3.03e-01 79.1% 55.8%
2vugA04 1.20.58.2250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 27.0 3.26e-01 74.1% 75.6%
3vkgA11 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.51 35.0 3.92e-01 86.3% 90.0%
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.51 40.0 3.25e-01 83.5% 88.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3484245 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 28.0 3.42e-01 87.1% 73.3%
3572779 3855.1.1.1 alpha arrays › Serum amyloid A-1 protein › Serum amyloid A-1 protein › Serum amyloid A-1 protein › SAA 0.56 31.0 3.44e-01 82.0% 66.4%
3561592 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 37.0 3.02e-01 74.8% 84.5%
3711339 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 35.0 3.55e-01 82.0% 71.1%
3670617 136.1.1.1 alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.50 32.0 2.87e-01 71.9% 42.8%