←Back to structures
ORF1
Euk-VirSimian_torque_teno_virus_31
ORF1__YP_009126942__Simian_torque_teno_virus_31__1619219
Identity
- Accession:
- YP_009126942 ↗
- Protein ID:
- ORF1
- Kingdom:
- euk
Quality
76.1
mean pLDDT
Taxonomy
Shotokuvirae›
Commensaviricota›
Cardeaviricetes›
Sanitavirales›
Anelloviridae›
Alphatorquevirus›
Simian_torque_teno_virus_31
TaxID: 1619219
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 85-262_562-584
Domain cluster:
rep: capsid__YP_009551495__Molossus_molossus_circovirus_3__1959844__D38-102_119-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02956.21 best | TT_ORF1 | 249.4 | 1.00e-73 | 91.0% | 34.1% |
D2
medium
residues 263-281_421-559
Domain cluster:
rep: ORF1__YP_009505738__Torque_teno_mini_virus_11__2065037__D379-509
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02956.21 best | TT_ORF1 | 137.7 | 7.50e-40 | 99.4% | 26.9% |
D3
medium
residues 282-420
Domain cluster:
rep: ORF1__YP_009126951__Simian_torque_teno_virus_30__1619218__D280-387
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jcpB01 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.57 | 30.0 | 2.71e-01 | 95.0% | 34.4% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 27.0 | 3.03e-01 | 79.1% | 55.8% |
| 2vugA04 | 1.20.58.2250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 27.0 | 3.26e-01 | 74.1% | 75.6% |
| 3vkgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 35.0 | 3.92e-01 | 86.3% | 90.0% |
| 2zxkA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.51 | 40.0 | 3.25e-01 | 83.5% | 88.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3484245 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 28.0 | 3.42e-01 | 87.1% | 73.3% |
| 3572779 | 3855.1.1.1 ↗ | alpha arrays › Serum amyloid A-1 protein › Serum amyloid A-1 protein › Serum amyloid A-1 protein › SAA | 0.56 | 31.0 | 3.44e-01 | 82.0% | 66.4% |
| 3561592 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 37.0 | 3.02e-01 | 74.8% | 84.5% |
| 3711339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 35.0 | 3.55e-01 | 82.0% | 71.1% |
| 3670617 | 136.1.1.1 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase | 0.50 | 32.0 | 2.87e-01 | 71.9% | 42.8% |