ORF1

Euk-Vir

Simian_torque_teno_virus_32

ORF1__YP_009126947__Simian_torque_teno_virus_32__1619220

Identity

76.8 mean pLDDT

Shotokuvirae› Commensaviricota› Cardeaviricetes› Sanitavirales› Anelloviridae› Alphatorquevirus› Simian_torque_teno_virus_32

TaxID: 1619220

View cluster (37 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 83-136_168-206_243-263_551-568

PDB

Domain cluster: rep: hypothetical_protein_TTtaV_gp2__YP_003587880__Torque_teno_tamarin_virus__687382__D74-140_159-191_229-253_527-541

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02956.21 best	TT_ORF1	49.1	5.40e-13	42.4%	10.5%
PF02956.21	TT_ORF1	35.0	1.00e-08	39.4%	8.4%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3jb8A00	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.56	52.0	4.60e-01	99.2%	89.2%
4nwvA01	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.55	50.0	4.52e-01	100.0%	84.2%
3l5hA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	22.0	2.72e-01	97.0%	60.3%
1x5kA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.50	29.0	3.24e-01	87.1%	73.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3217205	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.52	35.0	3.85e-01	96.2%	82.7%

D2 medium residues 137-167_207-242_569-581_611-637

PDB

Domain cluster: rep: hypothetical_protein__YP_009505778__Torque_teno_midi_virus_10__2065051__D108-155_198-230_491-509

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02956.21 best	TT_ORF1	40.8	1.70e-10	41.1%	6.9%
PF02956.21	TT_ORF1	37.6	1.70e-09	32.7%	6.1%

D3 medium residues 264-285_401-550

PDB

Domain cluster: rep: ORF1__YP_009505738__Torque_teno_mini_virus_11__2065037__D379-509

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02956.21 best	TT_ORF1	143.4	1.40e-41	98.3%	29.1%

D4 medium residues 286-400

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1st6A03	1.20.120.810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle	0.58	49.0	3.91e-01	92.2%	75.1%
3lmmA02	6.10.10.130	Special › Helix non-globular › Helicase, Ruva Protein; domain 3 ›	0.54	28.0	3.29e-01	100.0%	70.9%
2l9mA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.50	39.0	3.71e-01	81.7%	72.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3579205	192.4.1.25 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Rad21_Rec8_N	0.58	31.0	3.39e-01	74.8%	62.1%
5010173	192.29.1.302 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF998	0.53	44.0	3.87e-01	89.6%	89.4%
5049073	5050.1.1.10 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2	0.51	47.0	3.79e-01	100.0%	94.9%