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ORF1
Euk-VirSimian_torque_teno_virus_33
ORF1__YP_009129291__Simian_torque_teno_virus_33__1629656
Identity
- Accession:
- YP_009129291 ↗
- Protein ID:
- ORF1
- Kingdom:
- euk
Quality
76.9
mean pLDDT
Taxonomy
Shotokuvirae›
Commensaviricota›
Cardeaviricetes›
Sanitavirales›
Anelloviridae›
Alphatorquevirus›
Simian_torque_teno_virus_33
TaxID: 1629656
Cluster
View cluster (37 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 89-266_559-580
Domain cluster:
rep: capsid__YP_009551495__Molossus_molossus_circovirus_3__1959844__D38-102_119-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02956.21 best | TT_ORF1 | 219.7 | 1.10e-64 | 92.5% | 33.9% |
D2
medium
residues 275-295_417-556
Domain cluster:
rep: ORF1__YP_009505738__Torque_teno_mini_virus_11__2065037__D379-509
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02956.21 best | TT_ORF1 | 141.8 | 4.20e-41 | 99.4% | 28.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 30.0 | 3.95e-01 | 90.7% | 95.5% |
| 1ap8A00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.54 | 35.0 | 3.20e-01 | 81.4% | 48.8% |
| 4es8B02 | 2.60.40.3580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 32.0 | 3.87e-01 | 90.1% | 93.1% |
| 2je8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 4.04e-01 | 91.3% | 99.0% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 30.0 | 3.75e-01 | 91.9% | 95.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081326 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.70 | 29.0 | 4.26e-01 | 90.1% | 90.8% |
| 3251572 | 11.1.1.232 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SKICH | 0.55 | 34.0 | 4.15e-01 | 89.4% | 98.0% |
| 3759927 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.54 | 30.0 | 3.84e-01 | 88.8% | 94.4% |
| 5464 | 317.1.1.1 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › IF4E | 0.54 | 35.0 | 3.20e-01 | 81.4% | 48.8% |
| 5004446 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.52 | 37.0 | 3.20e-01 | 73.3% | 72.5% |
| 5081503 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.51 | 30.0 | 3.85e-01 | 88.2% | 100.0% |
| 4977225 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 30.0 | 3.64e-01 | 90.1% | 92.0% |
D3
medium
residues 296-416
Domain cluster:
rep: ORF1__YP_009126951__Simian_torque_teno_virus_30__1619218__D280-387
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.62 | 40.0 | 3.81e-01 | 96.7% | 54.2% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 32.0 | 3.58e-01 | 88.4% | 69.2% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.54 | 43.0 | 3.74e-01 | 83.5% | 84.1% |
| 3vkgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.51 | 37.0 | 3.91e-01 | 92.6% | 83.6% |
| 6v0kA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 38.0 | 2.89e-01 | 79.3% | 36.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616017 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 36.0 | 4.00e-01 | 90.1% | 68.4% |
| 3772226 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 36.0 | 4.08e-01 | 89.3% | 72.2% |
| 4967261 | 1075.3.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold | 0.62 | 45.0 | 2.92e-01 | 74.4% | 88.9% |
| 3888410 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.61 | 34.0 | 4.02e-01 | 86.8% | 77.6% |
| 3218728 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 35.0 | 4.14e-01 | 86.0% | 84.7% |
| 3251945 | 101.1.1.215 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › 3HBD | 0.57 | 37.0 | 4.19e-01 | 73.6% | 84.2% |
| 4100580 | 5001.1.1.3 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 | 0.51 | 38.0 | 3.01e-01 | 79.3% | 87.1% |